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Cluster: HRGMv2_0830_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0830_14 HRGMv2_0830_14_3 1447 3231 - 3.A.1.106.3
TC HRGMv2_0830_14 HRGMv2_0830_14_4 3233 4726 - 3.A.1.106.3
NULL(UNKNOWN) HRGMv2_0830_14 HRGMv2_0830_14_5 4856 4963 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0830_14 HRGMv2_0830_14_6 5457 6263 + CE4
pfam HRGMv2_0830_14 HRGMv2_0830_14_7 6485 7117 - FTCD_C
CAZyme HRGMv2_0830_14 HRGMv2_0830_14_8 7130 8275 - GT4
CAZyme HRGMv2_0830_14 HRGMv2_0830_14_9 8281 9561 - GT4
TC HRGMv2_0830_14 HRGMv2_0830_14_10 9579 11105 - 2.A.66.4.7
CAZyme HRGMv2_0830_14 HRGMv2_0830_14_11 11105 11842 - GT26
Gene ID: HRGMv2_0830_14_3
Type: TC
Location: 1447 - 3231 (-)
Gene ID: HRGMv2_0830_14_4
Type: TC
Location: 3233 - 4726 (-)
Gene ID: HRGMv2_0830_14_5
Type:
Location: 4856 - 4963 (-)
Gene ID: HRGMv2_0830_14_6
Type: CAZyme
Location: 5457 - 6263 (+)
Gene ID: HRGMv2_0830_14_7
Type: pfam
Location: 6485 - 7117 (-)
Gene ID: HRGMv2_0830_14_8
Type: CAZyme
Location: 7130 - 8275 (-)
Gene ID: HRGMv2_0830_14_9
Type: CAZyme
Location: 8281 - 9561 (-)
Gene ID: HRGMv2_0830_14_10
Type: TC
Location: 9579 - 11105 (-)
Gene ID: HRGMv2_0830_14_11
Type: CAZyme
Location: 11105 - 11842 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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