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Cluster: HRGMv2_0830_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0830_32 HRGMv2_0830_32_96 101218 102714 + GH77
TC HRGMv2_0830_32 HRGMv2_0830_32_97 102831 103595 + 1.A.1.17.2
pfam HRGMv2_0830_32 HRGMv2_0830_32_98 103833 104792 + 2-Hacid_dh | 2-Hacid_dh_C
pfam HRGMv2_0830_32 HRGMv2_0830_32_99 105130 106800 + HMGL-like | LeuA_dimer | IPMS_D2
TC HRGMv2_0830_32 HRGMv2_0830_32_100 107338 108744 + 2.A.25.1.4
CAZyme HRGMv2_0830_32 HRGMv2_0830_32_101 108981 109751 + GH73
pfam HRGMv2_0830_32 HRGMv2_0830_32_102 109821 110093 - Acylphosphatase
TC HRGMv2_0830_32 HRGMv2_0830_32_103 110246 111307 - 3.A.1.11.7
TC HRGMv2_0830_32 HRGMv2_0830_32_104 111309 112121 - 3.A.1.11.8
TC HRGMv2_0830_32 HRGMv2_0830_32_105 112139 112966 - 3.A.1.11.1
TC HRGMv2_0830_32 HRGMv2_0830_32_106 112950 114008 - 3.A.1.11.8
Gene ID: HRGMv2_0830_32_96
Type: CAZyme
Location: 101218 - 102714 (+)
Gene ID: HRGMv2_0830_32_97
Type: TC
Location: 102831 - 103595 (+)
Gene ID: HRGMv2_0830_32_98
Type: pfam
Location: 103833 - 104792 (+)
Gene ID: HRGMv2_0830_32_99
Type: pfam
Location: 105130 - 106800 (+)
Gene ID: HRGMv2_0830_32_100
Type: TC
Location: 107338 - 108744 (+)
Gene ID: HRGMv2_0830_32_101
Type: CAZyme
Location: 108981 - 109751 (+)
Gene ID: HRGMv2_0830_32_102
Type: pfam
Location: 109821 - 110093 (-)
Gene ID: HRGMv2_0830_32_103
Type: TC
Location: 110246 - 111307 (-)
Gene ID: HRGMv2_0830_32_104
Type: TC
Location: 111309 - 112121 (-)
Gene ID: HRGMv2_0830_32_105
Type: TC
Location: 112139 - 112966 (-)
Gene ID: HRGMv2_0830_32_106
Type: TC
Location: 112950 - 114008 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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