Cluster: HRGMv2_0830_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: beta-glucan
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_00042
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0830_36 | HRGMv2_0830_36_19 | 22809 | 24206 | - | GH1 |
| TF | HRGMv2_0830_36 | HRGMv2_0830_36_20 | 24492 | 25202 | - | GntR |
| TC | HRGMv2_0830_36 | HRGMv2_0830_36_21 | 25305 | 25664 | + | 4.A.3.2.6 |
| NULL(UNKNOWN) | HRGMv2_0830_36 | HRGMv2_0830_36_22 | 25806 | 26393 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0830_36 | HRGMv2_0830_36_23 | 26641 | 27819 | - | GH130_1 |
Gene ID: HRGMv2_0830_36_19
Type: CAZyme
Location: 22809 - 24206 (-)
Type: CAZyme
Location: 22809 - 24206 (-)
Gene ID: HRGMv2_0830_36_20
Type: TF
Location: 24492 - 25202 (-)
Type: TF
Location: 24492 - 25202 (-)
Gene ID: HRGMv2_0830_36_21
Type: TC
Location: 25305 - 25664 (+)
Type: TC
Location: 25305 - 25664 (+)
Gene ID: HRGMv2_0830_36_22
Type:
Location: 25806 - 26393 (-)
Type:
Location: 25806 - 26393 (-)
Gene ID: HRGMv2_0830_36_23
Type: CAZyme
Location: 26641 - 27819 (-)
Type: CAZyme
Location: 26641 - 27819 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.