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Cluster: HRGMv2_0830_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0830_78 HRGMv2_0830_78_6 7289 8851 - 2.A.66.1.40
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_7 8876 9859 - GT2
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_8 9877 11067 - GT4
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_9 11089 12117 - GT2
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_10 12147 13283 - GT4
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_11 13314 14318 - GT2
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_12 14361 15383 - GT2
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_13 15383 16417 - GT2
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_14 16433 17464 - GT2
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_15 17497 18582 - GT4
NULL(UNKNOWN) HRGMv2_0830_78 HRGMv2_0830_78_16 18576 19817 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_17 19834 20940 - GT4
CAZyme HRGMv2_0830_78 HRGMv2_0830_78_18 20961 22118 - GT4
pfam HRGMv2_0830_78 HRGMv2_0830_78_19 22087 22776 - PglD_N
TC HRGMv2_0830_78 HRGMv2_0830_78_20 22797 23492 - 8.A.3.1.2
pfam HRGMv2_0830_78 HRGMv2_0830_78_21 23443 24177 - Wzz
TC HRGMv2_0830_78 HRGMv2_0830_78_22 24293 24889 - 9.B.18.1.2
STP HRGMv2_0830_78 HRGMv2_0830_78_23 24975 26189 - Aminotran_1_2
TC HRGMv2_0830_78 HRGMv2_0830_78_24 26189 28102 - 9.B.18.2.1
Gene ID: HRGMv2_0830_78_6
Type: TC
Location: 7289 - 8851 (-)
Gene ID: HRGMv2_0830_78_7
Type: CAZyme
Location: 8876 - 9859 (-)
Gene ID: HRGMv2_0830_78_8
Type: CAZyme
Location: 9877 - 11067 (-)
Gene ID: HRGMv2_0830_78_9
Type: CAZyme
Location: 11089 - 12117 (-)
Gene ID: HRGMv2_0830_78_10
Type: CAZyme
Location: 12147 - 13283 (-)
Gene ID: HRGMv2_0830_78_11
Type: CAZyme
Location: 13314 - 14318 (-)
Gene ID: HRGMv2_0830_78_12
Type: CAZyme
Location: 14361 - 15383 (-)
Gene ID: HRGMv2_0830_78_13
Type: CAZyme
Location: 15383 - 16417 (-)
Gene ID: HRGMv2_0830_78_14
Type: CAZyme
Location: 16433 - 17464 (-)
Gene ID: HRGMv2_0830_78_15
Type: CAZyme
Location: 17497 - 18582 (-)
Gene ID: HRGMv2_0830_78_16
Type:
Location: 18576 - 19817 (-)
Gene ID: HRGMv2_0830_78_17
Type: CAZyme
Location: 19834 - 20940 (-)
Gene ID: HRGMv2_0830_78_18
Type: CAZyme
Location: 20961 - 22118 (-)
Gene ID: HRGMv2_0830_78_19
Type: pfam
Location: 22087 - 22776 (-)
Gene ID: HRGMv2_0830_78_20
Type: TC
Location: 22797 - 23492 (-)
Gene ID: HRGMv2_0830_78_21
Type: pfam
Location: 23443 - 24177 (-)
Gene ID: HRGMv2_0830_78_22
Type: TC
Location: 24293 - 24889 (-)
Gene ID: HRGMv2_0830_78_23
Type: STP
Location: 24975 - 26189 (-)
Gene ID: HRGMv2_0830_78_24
Type: TC
Location: 26189 - 28102 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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