Cluster: HRGMv2_0830_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0830_54 | HRGMv2_0830_54_8 | 10648 | 11361 | + | 4.B.1.1.2 |
| peptidase | HRGMv2_0830_54 | HRGMv2_0830_54_9 | 11538 | 13781 | + | S08.UNA |
| pfam | HRGMv2_0830_54 | HRGMv2_0830_54_10 | 14250 | 15083 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_0830_54 | HRGMv2_0830_54_11 | 15255 | 17114 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_0830_54 | HRGMv2_0830_54_12 | 17402 | 18811 | + | GH1 |
Gene ID: HRGMv2_0830_54_8
Type: TC
Location: 10648 - 11361 (+)
Type: TC
Location: 10648 - 11361 (+)
Gene ID: HRGMv2_0830_54_9
Type: peptidase
Location: 11538 - 13781 (+)
Type: peptidase
Location: 11538 - 13781 (+)
Gene ID: HRGMv2_0830_54_10
Type: pfam
Location: 14250 - 15083 (+)
Type: pfam
Location: 14250 - 15083 (+)
Gene ID: HRGMv2_0830_54_11
Type: TC
Location: 15255 - 17114 (+)
Type: TC
Location: 15255 - 17114 (+)
Gene ID: HRGMv2_0830_54_12
Type: CAZyme
Location: 17402 - 18811 (+)
Type: CAZyme
Location: 17402 - 18811 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.