Cluster: HRGMv2_0830_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_00162
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0830_4 | HRGMv2_0830_4_15 | 16226 | 17209 | + | 3.A.1.5.2 |
| TF | HRGMv2_0830_4 | HRGMv2_0830_4_16 | 17228 | 18088 | - | HTH_AraC |
| CAZyme | HRGMv2_0830_4 | HRGMv2_0830_4_17 | 18327 | 19496 | + | GH5_44 |
| CAZyme | HRGMv2_0830_4 | HRGMv2_0830_4_18 | 19594 | 21240 | + | CBM91 | GH43_11 |
| TC | HRGMv2_0830_4 | HRGMv2_0830_4_19 | 21268 | 22647 | + | 2.A.2.3.3 |
| TC | HRGMv2_0830_4 | HRGMv2_0830_4_20 | 22916 | 24559 | + | 2.A.36.6.4 |
Gene ID: HRGMv2_0830_4_15
Type: TC
Location: 16226 - 17209 (+)
Type: TC
Location: 16226 - 17209 (+)
Gene ID: HRGMv2_0830_4_16
Type: TF
Location: 17228 - 18088 (-)
Type: TF
Location: 17228 - 18088 (-)
Gene ID: HRGMv2_0830_4_17
Type: CAZyme
Location: 18327 - 19496 (+)
Type: CAZyme
Location: 18327 - 19496 (+)
Gene ID: HRGMv2_0830_4_18
Type: CAZyme
Location: 19594 - 21240 (+)
Type: CAZyme
Location: 19594 - 21240 (+)
Gene ID: HRGMv2_0830_4_19
Type: TC
Location: 21268 - 22647 (+)
Type: TC
Location: 21268 - 22647 (+)
Gene ID: HRGMv2_0830_4_20
Type: TC
Location: 22916 - 24559 (+)
Type: TC
Location: 22916 - 24559 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.