Cluster: HRGMv2_0830_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_02495
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0830_13 | HRGMv2_0830_13_141 | 145122 | 147203 | - | GH42 |
| pfam | HRGMv2_0830_13 | HRGMv2_0830_13_142 | 147655 | 149223 | - | SBP_bac_1 | DUF3502 |
| TC | HRGMv2_0830_13 | HRGMv2_0830_13_143 | 149275 | 150171 | - | 3.A.1.1.29 |
| TC | HRGMv2_0830_13 | HRGMv2_0830_13_144 | 150182 | 151177 | - | 3.A.1.1.10 |
| TF | HRGMv2_0830_13 | HRGMv2_0830_13_145 | 151423 | 152961 | + | HTH_AraC |
| TC | HRGMv2_0830_13 | HRGMv2_0830_13_146 | 152961 | 154772 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_0830_13_141
Type: CAZyme
Location: 145122 - 147203 (-)
Type: CAZyme
Location: 145122 - 147203 (-)
Gene ID: HRGMv2_0830_13_142
Type: pfam
Location: 147655 - 149223 (-)
Type: pfam
Location: 147655 - 149223 (-)
Gene ID: HRGMv2_0830_13_143
Type: TC
Location: 149275 - 150171 (-)
Type: TC
Location: 149275 - 150171 (-)
Gene ID: HRGMv2_0830_13_144
Type: TC
Location: 150182 - 151177 (-)
Type: TC
Location: 150182 - 151177 (-)
Gene ID: HRGMv2_0830_13_145
Type: TF
Location: 151423 - 152961 (+)
Type: TF
Location: 151423 - 152961 (+)
Gene ID: HRGMv2_0830_13_146
Type: TC
Location: 152961 - 154772 (+)
Type: TC
Location: 152961 - 154772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.