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Cluster: HRGMv2_0830_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0830_32 HRGMv2_0830_32_2 1385 2368 + 3.A.1.1.29
TC HRGMv2_0830_32 HRGMv2_0830_32_3 2425 3309 + 3.A.1.1.29
TC HRGMv2_0830_32 HRGMv2_0830_32_4 3387 5072 + 3.A.1.1.29
CAZyme HRGMv2_0830_32 HRGMv2_0830_32_5 5264 7603 + GH31_3
CAZyme HRGMv2_0830_32 HRGMv2_0830_32_6 7858 9993 + GH3
CAZyme HRGMv2_0830_32 HRGMv2_0830_32_7 10005 12326 + GH95
TC HRGMv2_0830_32 HRGMv2_0830_32_8 12616 14406 + 8.A.59.2.1
TF HRGMv2_0830_32 HRGMv2_0830_32_9 14400 15947 + HTH_AraC
pfam HRGMv2_0830_32 HRGMv2_0830_32_10 16081 16716 - ABC2_membrane_5
TC HRGMv2_0830_32 HRGMv2_0830_32_11 16720 17571 - 3.A.1.149.1
Gene ID: HRGMv2_0830_32_2
Type: TC
Location: 1385 - 2368 (+)
Gene ID: HRGMv2_0830_32_3
Type: TC
Location: 2425 - 3309 (+)
Gene ID: HRGMv2_0830_32_4
Type: TC
Location: 3387 - 5072 (+)
Gene ID: HRGMv2_0830_32_5
Type: CAZyme
Location: 5264 - 7603 (+)
Gene ID: HRGMv2_0830_32_6
Type: CAZyme
Location: 7858 - 9993 (+)
Gene ID: HRGMv2_0830_32_7
Type: CAZyme
Location: 10005 - 12326 (+)
Gene ID: HRGMv2_0830_32_8
Type: TC
Location: 12616 - 14406 (+)
Gene ID: HRGMv2_0830_32_9
Type: TF
Location: 14400 - 15947 (+)
Gene ID: HRGMv2_0830_32_10
Type: pfam
Location: 16081 - 16716 (-)
Gene ID: HRGMv2_0830_32_11
Type: TC
Location: 16720 - 17571 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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