Cluster: HRGMv2_0830_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0830_13 | HRGMv2_0830_13_105 | 103896 | 105305 | - | GH1 |
| TC | HRGMv2_0830_13 | HRGMv2_0830_13_106 | 105388 | 107280 | - | 4.A.1.2.11 |
| pfam | HRGMv2_0830_13 | HRGMv2_0830_13_107 | 107581 | 108417 | - | PRD | PRD | CAT_RBD |
| TC | HRGMv2_0830_13 | HRGMv2_0830_13_108 | 108788 | 110473 | - | 2.A.114.1.3 |
| pfam | HRGMv2_0830_13 | HRGMv2_0830_13_109 | 110801 | 111502 | - | MgtC |
| NULL(UNKNOWN) | HRGMv2_0830_13 | HRGMv2_0830_13_110 | 111634 | 112197 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0830_13 | HRGMv2_0830_13_111 | 112315 | 114576 | - | GT35 |
Gene ID: HRGMv2_0830_13_105
Type: CAZyme
Location: 103896 - 105305 (-)
Type: CAZyme
Location: 103896 - 105305 (-)
Gene ID: HRGMv2_0830_13_106
Type: TC
Location: 105388 - 107280 (-)
Type: TC
Location: 105388 - 107280 (-)
Gene ID: HRGMv2_0830_13_107
Type: pfam
Location: 107581 - 108417 (-)
Type: pfam
Location: 107581 - 108417 (-)
Gene ID: HRGMv2_0830_13_108
Type: TC
Location: 108788 - 110473 (-)
Type: TC
Location: 108788 - 110473 (-)
Gene ID: HRGMv2_0830_13_109
Type: pfam
Location: 110801 - 111502 (-)
Type: pfam
Location: 110801 - 111502 (-)
Gene ID: HRGMv2_0830_13_110
Type:
Location: 111634 - 112197 (-)
Type:
Location: 111634 - 112197 (-)
Gene ID: HRGMv2_0830_13_111
Type: CAZyme
Location: 112315 - 114576 (-)
Type: CAZyme
Location: 112315 - 114576 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.