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Cluster: HRGMv2_0830_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0830_54 HRGMv2_0830_54_18 25154 25978 - 1.A.23.2.1
pfam HRGMv2_0830_54 HRGMv2_0830_54_19 26279 26500 + DUF1659
pfam HRGMv2_0830_54 HRGMv2_0830_54_20 26523 26738 + DUF2922
TC HRGMv2_0830_54 HRGMv2_0830_54_21 27142 27924 + 3.A.1.3.2
TC HRGMv2_0830_54 HRGMv2_0830_54_22 28257 28907 + 3.A.1.3.25
TC HRGMv2_0830_54 HRGMv2_0830_54_23 28904 29635 + 3.A.1.3.25
CAZyme HRGMv2_0830_54 HRGMv2_0830_54_24 29847 32108 + GT2
Gene ID: HRGMv2_0830_54_18
Type: TC
Location: 25154 - 25978 (-)
Gene ID: HRGMv2_0830_54_19
Type: pfam
Location: 26279 - 26500 (+)
Gene ID: HRGMv2_0830_54_20
Type: pfam
Location: 26523 - 26738 (+)
Gene ID: HRGMv2_0830_54_21
Type: TC
Location: 27142 - 27924 (+)
Gene ID: HRGMv2_0830_54_22
Type: TC
Location: 28257 - 28907 (+)
Gene ID: HRGMv2_0830_54_23
Type: TC
Location: 28904 - 29635 (+)
Gene ID: HRGMv2_0830_54_24
Type: CAZyme
Location: 29847 - 32108 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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