Cluster: HRGMv2_0830_CGC51
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0830_66 | HRGMv2_0830_66_45 | 46246 | 49035 | - | GH2 |
| TF | HRGMv2_0830_66 | HRGMv2_0830_66_46 | 49341 | 50051 | - | GntR |
| CAZyme | HRGMv2_0830_66 | HRGMv2_0830_66_47 | 50086 | 51750 | - | GH13_29 |
| TC | HRGMv2_0830_66 | HRGMv2_0830_66_48 | 51848 | 53290 | - | 4.A.1.2.13 |
| NULL(UNKNOWN) | HRGMv2_0830_66 | HRGMv2_0830_66_49 | 53524 | 54321 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0830_66 | HRGMv2_0830_66_50 | 54658 | 55611 | + | 2.A.19.5.2 |
Gene ID: HRGMv2_0830_66_45
Type: CAZyme
Location: 46246 - 49035 (-)
Type: CAZyme
Location: 46246 - 49035 (-)
Gene ID: HRGMv2_0830_66_46
Type: TF
Location: 49341 - 50051 (-)
Type: TF
Location: 49341 - 50051 (-)
Gene ID: HRGMv2_0830_66_47
Type: CAZyme
Location: 50086 - 51750 (-)
Type: CAZyme
Location: 50086 - 51750 (-)
Gene ID: HRGMv2_0830_66_48
Type: TC
Location: 51848 - 53290 (-)
Type: TC
Location: 51848 - 53290 (-)
Gene ID: HRGMv2_0830_66_49
Type:
Location: 53524 - 54321 (+)
Type:
Location: 53524 - 54321 (+)
Gene ID: HRGMv2_0830_66_50
Type: TC
Location: 54658 - 55611 (+)
Type: TC
Location: 54658 - 55611 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.