Cluster: HRGMv2_0830_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0830_11 | HRGMv2_0830_11_43 | 50168 | 50884 | + | 2.A.115.2.12 |
| TC | HRGMv2_0830_11 | HRGMv2_0830_11_44 | 51043 | 51687 | + | 2.A.115.2.8 |
| pfam | HRGMv2_0830_11 | HRGMv2_0830_11_45 | 51938 | 52774 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_0830_11 | HRGMv2_0830_11_46 | 53145 | 55007 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_0830_11 | HRGMv2_0830_11_47 | 55030 | 56469 | + | GH1 |
Gene ID: HRGMv2_0830_11_43
Type: TC
Location: 50168 - 50884 (+)
Type: TC
Location: 50168 - 50884 (+)
Gene ID: HRGMv2_0830_11_44
Type: TC
Location: 51043 - 51687 (+)
Type: TC
Location: 51043 - 51687 (+)
Gene ID: HRGMv2_0830_11_45
Type: pfam
Location: 51938 - 52774 (+)
Type: pfam
Location: 51938 - 52774 (+)
Gene ID: HRGMv2_0830_11_46
Type: TC
Location: 53145 - 55007 (+)
Type: TC
Location: 53145 - 55007 (+)
Gene ID: HRGMv2_0830_11_47
Type: CAZyme
Location: 55030 - 56469 (+)
Type: CAZyme
Location: 55030 - 56469 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.