Cluster: HRGMv2_0830_CGC46
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0830_61 | HRGMv2_0830_61_6 | 4058 | 5434 | + | 4.A.1.2.11 |
| TC | HRGMv2_0830_61 | HRGMv2_0830_61_7 | 5632 | 5931 | + | 4.A.1.2.2 |
| CAZyme | HRGMv2_0830_61 | HRGMv2_0830_61_8 | 5956 | 7377 | + | GH1 |
| NULL(UNKNOWN) | HRGMv2_0830_61 | HRGMv2_0830_61_9 | 7435 | 7971 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0830_61 | HRGMv2_0830_61_10 | 8210 | 9190 | - | 3.A.1.2.17 |
| TC | HRGMv2_0830_61 | HRGMv2_0830_61_11 | 9195 | 10304 | - | 3.A.1.2.10 |
| TC | HRGMv2_0830_61 | HRGMv2_0830_61_12 | 10276 | 11832 | - | 3.A.1.2.12 |
Gene ID: HRGMv2_0830_61_6
Type: TC
Location: 4058 - 5434 (+)
Type: TC
Location: 4058 - 5434 (+)
Gene ID: HRGMv2_0830_61_7
Type: TC
Location: 5632 - 5931 (+)
Type: TC
Location: 5632 - 5931 (+)
Gene ID: HRGMv2_0830_61_8
Type: CAZyme
Location: 5956 - 7377 (+)
Type: CAZyme
Location: 5956 - 7377 (+)
Gene ID: HRGMv2_0830_61_9
Type:
Location: 7435 - 7971 (-)
Type:
Location: 7435 - 7971 (-)
Gene ID: HRGMv2_0830_61_10
Type: TC
Location: 8210 - 9190 (-)
Type: TC
Location: 8210 - 9190 (-)
Gene ID: HRGMv2_0830_61_11
Type: TC
Location: 9195 - 10304 (-)
Type: TC
Location: 9195 - 10304 (-)
Gene ID: HRGMv2_0830_61_12
Type: TC
Location: 10276 - 11832 (-)
Type: TC
Location: 10276 - 11832 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.