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Genome Details

Selected Rep_genome_ID: ChuDM_2017_SRR8942361_bin.4
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Lactobacillus
→
Species
Lactobacillus sp944327175
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR091485 1,888,616 96.62% 0% China Asia CGMR
ChuDM_2017_SRR8942361_bin.4 2,014,927 99.35% 0% US North America ELGG
GH125_bin.17_sub 1,650,359 97.54% 0.45% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ChuDM_2017_SRR8942361_bin.4_CGC15 CGCFAM_00004 Yes 7 4 alpha-glucan
ChuDM_2017_SRR8942361_bin.4_CGC19 CGCFAM_00020 Yes 8 1 host glycan/beta-glucan
ChuDM_2017_SRR8942361_bin.4_CGC22 CGCFAM_00094 Yes 5 1 beta-mannan/fructan
ChuDM_2017_SRR8942361_bin.4_CGC4 CGCFAM_00099 Yes 5 1
ChuDM_2017_SRR8942361_bin.4_CGC18 CGCFAM_00131 Yes 5 1
ChuDM_2017_SRR8942361_bin.4_CGC23 CGCFAM_00195 Yes 7 3
ChuDM_2017_SRR8942361_bin.4_CGC8 CGCFAM_00336 Yes 15 6 alpha-glucan
ChuDM_2017_SRR8942361_bin.4_CGC16 CGCFAM_00348 Yes 10 4
ChuDM_2017_SRR8942361_bin.4_CGC10 CGCFAM_01025 Yes 9 4
ChuDM_2017_SRR8942361_bin.4_CGC13 CGCFAM_01385 Yes 8 1
ChuDM_2017_SRR8942361_bin.4_CGC7 CGCFAM_02113 Yes 5 1
ChuDM_2017_SRR8942361_bin.4_CGC17 CGCFAM_04664 Yes 4 1
ChuDM_2017_SRR8942361_bin.4_CGC9 CGCFAM_05343 Yes 8 1
ChuDM_2017_SRR8942361_bin.4_CGC12 CGCFAM_08130 Yes 8 1
ChuDM_2017_SRR8942361_bin.4_CGC21 CGCFAM_09237 Yes 9 1
ChuDM_2017_SRR8942361_bin.4_CGC3 CGCFAM_09238 Yes 6 1
Top CAZyme Families