Cluster: ChuDM_2017_SRR8942361_bin.4_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.4
- CGC Family ID: CGCFAM_00099
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.4_k119_3262 | ChuDM_2017_SRR8942361_bin.4_k119_3262_48 | 47484 | 48698 | + | 2.A.1.15.12 |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_3262 | ChuDM_2017_SRR8942361_bin.4_k119_3262_49 | 48733 | 49491 | + | DHquinase_I |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942361_bin.4_k119_3262 | ChuDM_2017_SRR8942361_bin.4_k119_3262_50 | 49660 | 49839 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_3262 | ChuDM_2017_SRR8942361_bin.4_k119_3262_51 | 49920 | 51431 | - | GH1 |
| TC | ChuDM_2017_SRR8942361_bin.4_k119_3262 | ChuDM_2017_SRR8942361_bin.4_k119_3262_52 | 51546 | 53453 | - | 4.A.1.2.6 |
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_48
Type: TC
Location: 47484 - 48698 (+)
Type: TC
Location: 47484 - 48698 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_49
Type: pfam
Location: 48733 - 49491 (+)
Type: pfam
Location: 48733 - 49491 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_50
Type:
Location: 49660 - 49839 (+)
Type:
Location: 49660 - 49839 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_51
Type: CAZyme
Location: 49920 - 51431 (-)
Type: CAZyme
Location: 49920 - 51431 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_52
Type: TC
Location: 51546 - 53453 (-)
Type: TC
Location: 51546 - 53453 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.