Cluster: ChuDM_2017_SRR8942361_bin.4_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.4
- CGC Family ID: CGCFAM_04664
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_6278 | ChuDM_2017_SRR8942361_bin.4_k119_6278_6 | 4591 | 6096 | + | GT4 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942361_bin.4_k119_6278 | ChuDM_2017_SRR8942361_bin.4_k119_6278_7 | 6077 | 7432 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942361_bin.4_k119_6278 | ChuDM_2017_SRR8942361_bin.4_k119_6278_8 | 7755 | 8213 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ChuDM_2017_SRR8942361_bin.4_k119_6278 | ChuDM_2017_SRR8942361_bin.4_k119_6278_9 | 8680 | 9564 | + | 2.A.115.1.1 |
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6278_6
Type: CAZyme
Location: 4591 - 6096 (+)
Type: CAZyme
Location: 4591 - 6096 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6278_7
Type:
Location: 6077 - 7432 (+)
Type:
Location: 6077 - 7432 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6278_8
Type:
Location: 7755 - 8213 (+)
Type:
Location: 7755 - 8213 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6278_9
Type: TC
Location: 8680 - 9564 (+)
Type: TC
Location: 8680 - 9564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.