Cluster: ChuDM_2017_SRR8942361_bin.4_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: ChuDM_2017_SRR8942361_bin.4
- CGC Family ID: CGCFAM_00004
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.4_k119_5544 | ChuDM_2017_SRR8942361_bin.4_k119_5544_48 | 53378 | 53764 | + | 9.B.143.3.6 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_5544 | ChuDM_2017_SRR8942361_bin.4_k119_5544_49 | 54290 | 56188 | + | CBM48 | GH13_9 |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_5544 | ChuDM_2017_SRR8942361_bin.4_k119_5544_50 | 56243 | 57391 | + | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_5544 | ChuDM_2017_SRR8942361_bin.4_k119_5544_51 | 57378 | 58520 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_5544 | ChuDM_2017_SRR8942361_bin.4_k119_5544_52 | 58536 | 59966 | + | GT5 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_5544 | ChuDM_2017_SRR8942361_bin.4_k119_5544_53 | 59991 | 62441 | + | GT35 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_5544 | ChuDM_2017_SRR8942361_bin.4_k119_5544_54 | 62451 | 64253 | + | GH13_39 |
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_5544_48
Type: TC
Location: 53378 - 53764 (+)
Type: TC
Location: 53378 - 53764 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_5544_49
Type: CAZyme
Location: 54290 - 56188 (+)
Type: CAZyme
Location: 54290 - 56188 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_5544_50
Type: pfam
Location: 56243 - 57391 (+)
Type: pfam
Location: 56243 - 57391 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_5544_51
Type: pfam
Location: 57378 - 58520 (+)
Type: pfam
Location: 57378 - 58520 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_5544_52
Type: CAZyme
Location: 58536 - 59966 (+)
Type: CAZyme
Location: 58536 - 59966 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_5544_53
Type: CAZyme
Location: 59991 - 62441 (+)
Type: CAZyme
Location: 59991 - 62441 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_5544_54
Type: CAZyme
Location: 62451 - 64253 (+)
Type: CAZyme
Location: 62451 - 64253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.