Cluster: ChuDM_2017_SRR8942361_bin.4_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.4
- CGC Family ID: CGCFAM_01025
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_11 | 10995 | 12422 | + | 2.A.66.2.16 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_12 | 12473 | 13207 | + | GT26 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_13 | 13207 | 14307 | + | GT4 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_14 | 14304 | 15005 | + | GT32 |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_15 | 15110 | 15940 | + | NAD_synthase |
| TC | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_16 | 16146 | 18812 | + | 3.A.3.2.28 |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_17 | 19252 | 19749 | + | SprT-like |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_18 | 19988 | 20611 | + | ECF_trnsprt |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_4275 | ChuDM_2017_SRR8942361_bin.4_k119_4275_19 | 20625 | 21278 | + | GH73 |
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_11
Type: TC
Location: 10995 - 12422 (+)
Type: TC
Location: 10995 - 12422 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_12
Type: CAZyme
Location: 12473 - 13207 (+)
Type: CAZyme
Location: 12473 - 13207 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_13
Type: CAZyme
Location: 13207 - 14307 (+)
Type: CAZyme
Location: 13207 - 14307 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_14
Type: CAZyme
Location: 14304 - 15005 (+)
Type: CAZyme
Location: 14304 - 15005 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_15
Type: pfam
Location: 15110 - 15940 (+)
Type: pfam
Location: 15110 - 15940 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_16
Type: TC
Location: 16146 - 18812 (+)
Type: TC
Location: 16146 - 18812 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_17
Type: pfam
Location: 19252 - 19749 (+)
Type: pfam
Location: 19252 - 19749 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_18
Type: pfam
Location: 19988 - 20611 (+)
Type: pfam
Location: 19988 - 20611 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4275_19
Type: CAZyme
Location: 20625 - 21278 (+)
Type: CAZyme
Location: 20625 - 21278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.