Cluster: ChuDM_2017_SRR8942361_bin.4_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: beta-mannan/fructan
- Genome ID: ChuDM_2017_SRR8942361_bin.4
- CGC Family ID: CGCFAM_00094
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.4_k119_11807 | ChuDM_2017_SRR8942361_bin.4_k119_11807_3 | 1674 | 3620 | - | 4.A.1.2.12 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_11807 | ChuDM_2017_SRR8942361_bin.4_k119_11807_4 | 3900 | 5357 | + | GH32 |
| TF | ChuDM_2017_SRR8942361_bin.4_k119_11807 | ChuDM_2017_SRR8942361_bin.4_k119_11807_5 | 5380 | 6366 | + | LacI |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942361_bin.4_k119_11807 | ChuDM_2017_SRR8942361_bin.4_k119_11807_6 | 6492 | 6677 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ChuDM_2017_SRR8942361_bin.4_k119_11807 | ChuDM_2017_SRR8942361_bin.4_k119_11807_7 | 6792 | 7328 | + | 1.A.78.2.1 |
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_11807_3
Type: TC
Location: 1674 - 3620 (-)
Type: TC
Location: 1674 - 3620 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_11807_4
Type: CAZyme
Location: 3900 - 5357 (+)
Type: CAZyme
Location: 3900 - 5357 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_11807_5
Type: TF
Location: 5380 - 6366 (+)
Type: TF
Location: 5380 - 6366 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_11807_6
Type:
Location: 6492 - 6677 (+)
Type:
Location: 6492 - 6677 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_11807_7
Type: TC
Location: 6792 - 7328 (+)
Type: TC
Location: 6792 - 7328 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.