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Cluster: ChuDM_2017_SRR8942361_bin.4_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942361_bin.4_k119_13639 ChuDM_2017_SRR8942361_bin.4_k119_13639_36 34226 35011 + 8.A.3.2.1
pfam ChuDM_2017_SRR8942361_bin.4_k119_13639 ChuDM_2017_SRR8942361_bin.4_k119_13639_37 35015 35791 + CpsB_CapC
TC ChuDM_2017_SRR8942361_bin.4_k119_13639 ChuDM_2017_SRR8942361_bin.4_k119_13639_38 35822 36487 + 9.B.18.1.2
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_13639 ChuDM_2017_SRR8942361_bin.4_k119_13639_39 36490 37173 + GT2
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_13639 ChuDM_2017_SRR8942361_bin.4_k119_13639_40 37295 38047 + GT111
pfam ChuDM_2017_SRR8942361_bin.4_k119_13639 ChuDM_2017_SRR8942361_bin.4_k119_13639_41 38057 39127 + Glyco_tran_WbsX
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_13639 ChuDM_2017_SRR8942361_bin.4_k119_13639_42 39309 40385 + GT4
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_13639_36
Type: TC
Location: 34226 - 35011 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_13639_37
Type: pfam
Location: 35015 - 35791 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_13639_38
Type: TC
Location: 35822 - 36487 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_13639_39
Type: CAZyme
Location: 36490 - 37173 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_13639_40
Type: CAZyme
Location: 37295 - 38047 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_13639_41
Type: pfam
Location: 38057 - 39127 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_13639_42
Type: CAZyme
Location: 39309 - 40385 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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