Cluster: ChuDM_2017_SRR8942361_bin.4_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.4
- CGC Family ID: CGCFAM_02113
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.4_k119_4053 | ChuDM_2017_SRR8942361_bin.4_k119_4053_10 | 11289 | 13127 | - | 2.A.37.2.2 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942361_bin.4_k119_4053 | ChuDM_2017_SRR8942361_bin.4_k119_4053_11 | 13185 | 13379 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_4053 | ChuDM_2017_SRR8942361_bin.4_k119_4053_12 | 13401 | 14699 | - | OrfB_IS605 | Cas12f1-like_TNB | HTH_OrfB_IS605 |
| TC | ChuDM_2017_SRR8942361_bin.4_k119_4053 | ChuDM_2017_SRR8942361_bin.4_k119_4053_13 | 15029 | 16981 | - | 1.C.105.2.6 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_4053 | ChuDM_2017_SRR8942361_bin.4_k119_4053_14 | 17003 | 18205 | - | GH73 |
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_10
Type: TC
Location: 11289 - 13127 (-)
Type: TC
Location: 11289 - 13127 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_11
Type:
Location: 13185 - 13379 (-)
Type:
Location: 13185 - 13379 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_12
Type: pfam
Location: 13401 - 14699 (-)
Type: pfam
Location: 13401 - 14699 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_13
Type: TC
Location: 15029 - 16981 (-)
Type: TC
Location: 15029 - 16981 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_14
Type: CAZyme
Location: 17003 - 18205 (-)
Type: CAZyme
Location: 17003 - 18205 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.