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Cluster: ChuDM_2017_SRR8942361_bin.4_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942361_bin.4_k119_3262 ChuDM_2017_SRR8942361_bin.4_k119_3262_4 3244 4122 + 3.A.1.14.17
TC ChuDM_2017_SRR8942361_bin.4_k119_3262 ChuDM_2017_SRR8942361_bin.4_k119_3262_5 4122 5006 + 3.A.1.14.17
TC ChuDM_2017_SRR8942361_bin.4_k119_3262 ChuDM_2017_SRR8942361_bin.4_k119_3262_6 5003 5710 + 3.A.1.14.14
TC ChuDM_2017_SRR8942361_bin.4_k119_3262 ChuDM_2017_SRR8942361_bin.4_k119_3262_7 5824 6543 - 1.A.8.2.8
pfam ChuDM_2017_SRR8942361_bin.4_k119_3262 ChuDM_2017_SRR8942361_bin.4_k119_3262_8 7179 9131 + PTPS_related
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_3262 ChuDM_2017_SRR8942361_bin.4_k119_3262_9 9137 10084 + GT2
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_4
Type: TC
Location: 3244 - 4122 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_5
Type: TC
Location: 4122 - 5006 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_6
Type: TC
Location: 5003 - 5710 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_7
Type: TC
Location: 5824 - 6543 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_8
Type: pfam
Location: 7179 - 9131 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3262_9
Type: CAZyme
Location: 9137 - 10084 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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