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Cluster: ChuDM_2017_SRR8942361_bin.4_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_40 46177 47325 - CE9
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_41 47856 50861 + GH31_18
TC ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_42 51012 51869 - 3.A.1.1.27
TC ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_43 51872 53230 - 3.A.1.1.27
TC ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_44 53284 54501 - 3.A.1.1.27
TC ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_45 54611 55717 - 3.A.1.1.20
pfam ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_46 55728 56393 - Hydrolase | HAD_2
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_47 56378 58654 - GH65
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_48 58748 60451 - CBM34 | GH13_20
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_49 60506 62167 - GH13_31
TF ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_50 62286 63245 - LacI
CAZyme ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_51 63394 65016 - GH13_31
peptidase ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_52 65177 66043 - S09.UPW
TC ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_53 66009 66803 - 9.B.141.1.2
TC ChuDM_2017_SRR8942361_bin.4_k119_4053 ChuDM_2017_SRR8942361_bin.4_k119_4053_54 66800 67909 - 9.B.141.1.3
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_40
Type: CAZyme
Location: 46177 - 47325 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_41
Type: CAZyme
Location: 47856 - 50861 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_42
Type: TC
Location: 51012 - 51869 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_43
Type: TC
Location: 51872 - 53230 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_44
Type: TC
Location: 53284 - 54501 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_45
Type: TC
Location: 54611 - 55717 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_46
Type: pfam
Location: 55728 - 56393 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_47
Type: CAZyme
Location: 56378 - 58654 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_48
Type: CAZyme
Location: 58748 - 60451 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_49
Type: CAZyme
Location: 60506 - 62167 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_50
Type: TF
Location: 62286 - 63245 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_51
Type: CAZyme
Location: 63394 - 65016 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_52
Type: peptidase
Location: 65177 - 66043 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_53
Type: TC
Location: 66009 - 66803 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_4053_54
Type: TC
Location: 66800 - 67909 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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