Cluster: ChuDM_2017_SRR8942361_bin.4_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.4
- CGC Family ID: CGCFAM_00131
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_6284 | ChuDM_2017_SRR8942361_bin.4_k119_6284_9 | 9479 | 10813 | + | GH4 |
| TC | ChuDM_2017_SRR8942361_bin.4_k119_6284 | ChuDM_2017_SRR8942361_bin.4_k119_6284_10 | 10883 | 12766 | + | 4.A.1.1.8 |
| TF | ChuDM_2017_SRR8942361_bin.4_k119_6284 | ChuDM_2017_SRR8942361_bin.4_k119_6284_11 | 12850 | 13632 | + | HTH_6 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942361_bin.4_k119_6284 | ChuDM_2017_SRR8942361_bin.4_k119_6284_12 | 13632 | 14132 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ChuDM_2017_SRR8942361_bin.4_k119_6284 | ChuDM_2017_SRR8942361_bin.4_k119_6284_13 | 14138 | 14626 | + | 4.A.1.1.1 |
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6284_9
Type: CAZyme
Location: 9479 - 10813 (+)
Type: CAZyme
Location: 9479 - 10813 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6284_10
Type: TC
Location: 10883 - 12766 (+)
Type: TC
Location: 10883 - 12766 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6284_11
Type: TF
Location: 12850 - 13632 (+)
Type: TF
Location: 12850 - 13632 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6284_12
Type:
Location: 13632 - 14132 (+)
Type:
Location: 13632 - 14132 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_6284_13
Type: TC
Location: 14138 - 14626 (+)
Type: TC
Location: 14138 - 14626 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.