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Genome Details

Selected Rep_genome_ID: C50.bin_3
Total Genomes Found: 10
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides stercoris
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG412_127 3,708,079 98.2% 0.53% NA Africa H3AfricaPhase2
C50.bin_3 4,055,818 99.26% 0% China(Inner Mongolia) Asia IMGG
CGMR088070 3,364,640 96.55% 0% China Asia CGMR
Rep_467 3,909,752 99.2565% 0.371747% NA NA WIS
SPMP09_bin.21 3,326,045 93.85% 0.37% Singapore Asia SPMP
SPMP29_bin.32 3,493,607 98.19% 0.43% Singapore Asia SPMP
SPMP34_bin.21 3,341,656 95.4% 0.37% Singapore Asia SPMP
SPMP49_bin.99 3,516,625 98.33% 0.19% Singapore Asia SPMP
SPMP55_bin.23 3,442,495 93.98% 2.04% Singapore Asia SPMP
SPMP69_bin.72 3,428,064 91.34% 0% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
C50.bin_3_CGC48 CGCFAM_00005 Yes 6 3
C50.bin_3_CGC26 CGCFAM_00013 Yes 4 1
C50.bin_3_CGC41 CGCFAM_00017 Yes 7 2 fructan
C50.bin_3_CGC46 CGCFAM_00059 Yes 8 1
C50.bin_3_CGC27 CGCFAM_00079 Yes 5 2 pectin
C50.bin_3_CGC23 CGCFAM_00080 Yes 3 1
C50.bin_3_CGC29 CGCFAM_00138 Yes 10 2
C50.bin_3_CGC34 CGCFAM_00152 Yes 8 4
C50.bin_3_CGC7 CGCFAM_00197 Yes 4 1
C50.bin_3_CGC12 CGCFAM_00219 Yes 6 2 host glycan
C50.bin_3_CGC33 CGCFAM_00219 Yes 8 4 host glycan
C50.bin_3_CGC28 CGCFAM_00239 Yes 11 6 xylan
C50.bin_3_CGC38 CGCFAM_00273 Yes 28 19 xylan
C50.bin_3_CGC47 CGCFAM_00297 Yes 12 4
C50.bin_3_CGC30 CGCFAM_00298 Yes 10 5 pectin
C50.bin_3_CGC8 CGCFAM_00406 Yes 9 2
C50.bin_3_CGC6 CGCFAM_00496 Yes 4 1
C50.bin_3_CGC22 CGCFAM_00536 Yes 5 1
C50.bin_3_CGC5 CGCFAM_00556 Yes 3 1
C50.bin_3_CGC24 CGCFAM_00584 Yes 8 2
C50.bin_3_CGC31 CGCFAM_00655 Yes 4 1
C50.bin_3_CGC42 CGCFAM_00937 Yes 15 5
C50.bin_3_CGC15 CGCFAM_00948 Yes 9 2
C50.bin_3_CGC36 CGCFAM_01268 Yes 14 7
C50.bin_3_CGC50 CGCFAM_01269 Yes 15 1
Top CAZyme Families