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Cluster: C50.bin_3_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C50_contig_11 C50_contig_11_1991 2266579 2269725 + 1.B.14.6.1
pfam C50_contig_11 C50_contig_11_1992 2269737 2271422 + SusD_RagB | SusD-like_3
CAZyme C50_contig_11 C50_contig_11_1993 2271584 2274511 + GH92
pfam C50_contig_11 C50_contig_11_1994 2274526 2275389 + Exo_endo_phos
pfam C50_contig_11 C50_contig_11_1995 2275532 2276671 + Alk_phosphatase | Metalloenzyme
CAZyme C50_contig_11 C50_contig_11_1996 2276689 2278293 + GH63
CAZyme C50_contig_11 C50_contig_11_1997 2278305 2279756 + GH125
CAZyme C50_contig_11 C50_contig_11_1998 2279753 2282077 + GH20
Gene ID: C50_contig_11_1991
Type: TC
Location: 2266579 - 2269725 (+)
Gene ID: C50_contig_11_1992
Type: pfam
Location: 2269737 - 2271422 (+)
Gene ID: C50_contig_11_1993
Type: CAZyme
Location: 2271584 - 2274511 (+)
Gene ID: C50_contig_11_1994
Type: pfam
Location: 2274526 - 2275389 (+)
Gene ID: C50_contig_11_1995
Type: pfam
Location: 2275532 - 2276671 (+)
Gene ID: C50_contig_11_1996
Type: CAZyme
Location: 2276689 - 2278293 (+)
Gene ID: C50_contig_11_1997
Type: CAZyme
Location: 2278305 - 2279756 (+)
Gene ID: C50_contig_11_1998
Type: CAZyme
Location: 2279753 - 2282077 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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