Cluster: C50.bin_3_CGC48
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: C50.bin_3
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C50_contig_11 | C50_contig_11_2488 | 2930718 | 2931353 | + | 9.B.18.1.3 |
| NULL(UNKNOWN) | C50_contig_11 | C50_contig_11_2489 | 2931685 | 2933202 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C50_contig_11 | C50_contig_11_2490 | 2933243 | 2934160 | + | GINT1_N |
| CAZyme | C50_contig_11 | C50_contig_11_2491 | 2934160 | 2935320 | + | GT4 |
| CAZyme | C50_contig_11 | C50_contig_11_2492 | 2935365 | 2936114 | + | GT32 |
| CAZyme | C50_contig_11 | C50_contig_11_2493 | 2936121 | 2936933 | + | GT2 |
Gene ID: C50_contig_11_2488
Type: TC
Location: 2930718 - 2931353 (+)
Type: TC
Location: 2930718 - 2931353 (+)
Gene ID: C50_contig_11_2489
Type:
Location: 2931685 - 2933202 (+)
Type:
Location: 2931685 - 2933202 (+)
Gene ID: C50_contig_11_2490
Type: pfam
Location: 2933243 - 2934160 (+)
Type: pfam
Location: 2933243 - 2934160 (+)
Gene ID: C50_contig_11_2491
Type: CAZyme
Location: 2934160 - 2935320 (+)
Type: CAZyme
Location: 2934160 - 2935320 (+)
Gene ID: C50_contig_11_2492
Type: CAZyme
Location: 2935365 - 2936114 (+)
Type: CAZyme
Location: 2935365 - 2936114 (+)
Gene ID: C50_contig_11_2493
Type: CAZyme
Location: 2936121 - 2936933 (+)
Type: CAZyme
Location: 2936121 - 2936933 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.