PROTEIN: C50_contig_11_2489
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Protein File & Metadata
Source:
C50_contig_11_2489.pdb
Genome ID:
Protein ID:
C50_contig_11_2489
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Protein Sequence
MDKTKKIAVN TIFLCFRMLV LMLISFYSSR VLLKELGVTD FGIYGLVGGV VAIFSSLRGL 60 FATATQRFLN YEMGNDNIGA LQKVFNMSIL INVIISLVFC IIAEGIGLWF LNNKLVIDSA 120 RMVSAHWVFH LSILASMVSI MTIPFDAVII AHERMSFYAF ISILNAFLRL GAILILPFFA 180 MDKLQLYSML ILAVSLLMRL LCSIYCKVNF EECKYKFYWN KSLFKEMGSF AGWNFAGSFA 240 YSYVNEGLNI VLNLFGGVVV NAARTIAYQI KNAITTLLYN VMLAIQPQAT QLYAKGEFNS 300 FFKMLFVGAR VVVFFYLSIA FPVYFYIEDI LSIWLTTVPE HTIAFVRTIL IYLAIRSFHE 360 PIDIFYMIIG KLKVYQITEF IVLGAALPLS YIVLKYTSLP LYSVFIIMAI VEFINFFIIL 420 YIAKRIGRFD LELYVKKVFV PFFYTFFCMC FCSYLINIIY NSYEYTAYYC ILPILINVLC 480 FCGISLMFGF NLEERKALKR IILRK 505
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8812 |
0.899 |
| AF-H9L497-F1-model_v4 | 1 | 505 | 1 | 483 | 0.8773 |
0.9189 |
| AF-Q2G262-F1-model_v4 | 1 | 505 | 1 | 476 | 0.8751 |
0.9146 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 505 | 1 | 477 | 0.8746 |
0.915 |
| AF-Q8DPI1-F1-model_v4 | 1 | 505 | 1 | 491 | 0.872 |
0.9015 |
| AF-P77377-F1-model_v4 | 1 | 505 | 1 | 485 | 0.8665 |
0.9055 |
| AF-Q32ET1-F1-model_v4 | 3 | 498 | 1 | 509 | 0.8527 |
0.889 |
| AF-P37169-F1-model_v4 | 1 | 501 | 8 | 524 | 0.8504 |
0.8884 |
| AF-P0AF16-F1-model_v4 | 1 | 501 | 1 | 510 | 0.8498 |
0.8782 |
| AF-Q2FXH6-F1-model_v4 | 1 | 505 | 1 | 548 | 0.8447 |
0.8967 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 504 | 1 | 508 | 0.8696 |
0.8942 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 505 | 37 | 545 | 0.8294 |
0.8755 |
| QNU38870.1 | GT4 | 5 | 505 | 1 | 475 | 0.7795 |
0.9106 |
| QJC17489.1 | GT2 | 1 | 505 | 338 | 845 | 0.7288 |
0.9188 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 504 | 1 | 592 | 0.688 |
0.8892 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 505 | 1 | 619 | 0.6854 |
0.8654 |
| AF-D1BIF1-F1-model_v4 | GT4 | 4 | 505 | 9 | 656 | 0.68 |
0.9011 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 7 | 505 | 1 | 580 | 0.6783 |
0.8607 |
| A0A4V3CWU6 | GT4 | 7 | 500 | 1 | 555 | 0.6711 |
0.8613 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 505 | 4 | 670 | 0.6673 |
0.852 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 504 | 1 | 508 | 0.8696 |
0.8942 |
| A0A160T2N7 | GT28 | 1 | 505 | 37 | 545 | 0.8294 |
0.8755 |
| QNU38870.1 | GT4 | 5 | 505 | 1 | 475 | 0.7795 |
0.9106 |
| QJC17489.1 | GT2 | 1 | 505 | 338 | 845 | 0.7288 |
0.9188 |
| A0A3Q9G719 | GT4 | 1 | 504 | 1 | 592 | 0.688 |
0.8892 |
| A0A3T0RPT8 | GT4 | 1 | 505 | 1 | 619 | 0.6854 |
0.8654 |
| D1BIF1 | GT4 | 4 | 505 | 9 | 656 | 0.68 |
0.9011 |
| A0A2U8PPB3 | GT4 | 7 | 505 | 1 | 580 | 0.6783 |
0.8607 |
| A0A4V3CWU6 | GT4 | 7 | 500 | 1 | 555 | 0.6711 |
0.8613 |
| A0A517Z2I8 | GT2 | 1 | 505 | 4 | 670 | 0.6673 |
0.852 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 13 | 498 | 1 | 496 | 0.8434 |
0.8842 |
| 6nc6-assembly2.cif.gz_B | 9 | 496 | 1 | 461 | 0.8288 |
0.8814 |
| 7wag-assembly1.cif.gz_A | 4 | 498 | 1 | 509 | 0.8196 |
0.8668 |
| 6fhz-assembly1.cif.gz_A | 8 | 431 | 7 | 436 | 0.7869 |
0.8849 |
| 6cc4-assembly1.cif.gz_A | 1 | 502 | 56 | 608 | 0.7851 |
0.8747 |
| 5y50-assembly1.cif.gz_A | 3 | 428 | 5 | 436 | 0.6952 |
0.7922 |
| 4mlb-assembly1.cif.gz_C | 1 | 429 | 5 | 448 | 0.6857 |
0.7796 |
| 6hfb-assembly3.cif.gz_C | 1 | 429 | 5 | 444 | 0.6855 |
0.7775 |
| 5xjj-assembly1.cif.gz_A | 2 | 428 | 6 | 437 | 0.6823 |
0.7766 |
| 3wbn-assembly1.cif.gz_A | 1 | 429 | 3 | 446 | 0.6806 |
0.7727 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 5 | 505 | 1 | 501 | 0.912 |
0.9319 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8812 |
0.899 |
| AF-Q48457-F1-model_v4 | 1 | 505 | 1 | 484 | 0.8779 |
0.9118 |
| AF-P77377-F1-model_v4 | 1 | 505 | 1 | 485 | 0.8665 |
0.9055 |
| AF-O83529-F1-model_v4 | 1 | 505 | 1 | 525 | 0.8578 |
0.8908 |
| AF-O34238-F1-model_v4 | 1 | 498 | 4 | 522 | 0.8564 |
0.8995 |
| AF-P33699-F1-model_v4 | 1 | 505 | 4 | 487 | 0.8525 |
0.8953 |
| AF-O34674-F1-model_v4 | 3 | 505 | 1 | 539 | 0.8512 |
0.9 |
| AF-O67658-F1-model_v4 | 4 | 505 | 1 | 495 | 0.8511 |
0.8797 |
| AF-O32273-F1-model_v4 | 1 | 505 | 2 | 482 | 0.8504 |
0.8901 |