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Cluster: C50.bin_3_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C50_contig_11 C50_contig_11_1951 2213451 2215451 - PL12_2
CAZyme C50_contig_11 C50_contig_11_1952 2215479 2216756 - GH88
TC C50_contig_11 C50_contig_11_1953 2216957 2218708 - 8.A.46.1.3
TC C50_contig_11 C50_contig_11_1954 2218728 2221889 - 1.B.14.6.1
pfam C50_contig_11 C50_contig_11_1955 2221917 2224295 - SGBP_BT4661-like
CAZyme C50_contig_11 C50_contig_11_1956 2224317 2226470 - PL12_2
TF C50_contig_11 C50_contig_11_1957 2226976 2231040 - HTH_AraC
CAZyme C50_contig_11 C50_contig_11_1958 2231213 2232391 + PL13
Gene ID: C50_contig_11_1951
Type: CAZyme
Location: 2213451 - 2215451 (-)
Gene ID: C50_contig_11_1952
Type: CAZyme
Location: 2215479 - 2216756 (-)
Gene ID: C50_contig_11_1953
Type: TC
Location: 2216957 - 2218708 (-)
Gene ID: C50_contig_11_1954
Type: TC
Location: 2218728 - 2221889 (-)
Gene ID: C50_contig_11_1955
Type: pfam
Location: 2221917 - 2224295 (-)
Gene ID: C50_contig_11_1956
Type: CAZyme
Location: 2224317 - 2226470 (-)
Gene ID: C50_contig_11_1957
Type: TF
Location: 2226976 - 2231040 (-)
Gene ID: C50_contig_11_1958
Type: CAZyme
Location: 2231213 - 2232391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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