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Cluster: C50.bin_3_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C50_contig_11 C50_contig_11_226 216626 217612 + GH109
pfam C50_contig_11 C50_contig_11_227 217718 218143 - HIT
TC C50_contig_11 C50_contig_11_228 218200 220467 - 2.A.37.1.5
STP C50_contig_11 C50_contig_11_229 220719 221135 + Glyoxalase
TC C50_contig_11 C50_contig_11_230 221203 222756 + 3.B.1.1.2
pfam C50_contig_11 C50_contig_11_231 222804 223736 + LTD | OAD_gamma
pfam C50_contig_11 C50_contig_11_232 223762 224193 + Biotin_lipoyl | Biotin_lipoyl_2
TC C50_contig_11 C50_contig_11_233 224195 225355 + 3.B.1.1.2
CAZyme C50_contig_11 C50_contig_11_234 225464 227314 + GH13_46
Gene ID: C50_contig_11_226
Type: CAZyme
Location: 216626 - 217612 (+)
Gene ID: C50_contig_11_227
Type: pfam
Location: 217718 - 218143 (-)
Gene ID: C50_contig_11_228
Type: TC
Location: 218200 - 220467 (-)
Gene ID: C50_contig_11_229
Type: STP
Location: 220719 - 221135 (+)
Gene ID: C50_contig_11_230
Type: TC
Location: 221203 - 222756 (+)
Gene ID: C50_contig_11_231
Type: pfam
Location: 222804 - 223736 (+)
Gene ID: C50_contig_11_232
Type: pfam
Location: 223762 - 224193 (+)
Gene ID: C50_contig_11_233
Type: TC
Location: 224195 - 225355 (+)
Gene ID: C50_contig_11_234
Type: CAZyme
Location: 225464 - 227314 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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