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Cluster: C50.bin_3_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C50_contig_11 C50_contig_11_752 827910 829256 + 1.A.26.1.2
pfam C50_contig_11 C50_contig_11_753 829372 831225 + DUF349 | DUF349 | DUF349 | DUF349 | DUF349
CAZyme C50_contig_11 C50_contig_11_754 831320 833731 + PL8_3
NULL(UNKNOWN) C50_contig_11 C50_contig_11_755 833818 834057 - NULL(UNKNOWN)
[View Structural Homologs]
pfam C50_contig_11 C50_contig_11_756 834215 834574 + RsfS
TC C50_contig_11 C50_contig_11_757 834584 836611 + 3.A.16.1.1
pfam C50_contig_11 C50_contig_11_758 836624 837463 + CTP_transf_1
pfam C50_contig_11 C50_contig_11_759 837559 838302 - NigD_N | NigD_C
CAZyme C50_contig_11 C50_contig_11_760 838404 839552 - GT19
Gene ID: C50_contig_11_752
Type: TC
Location: 827910 - 829256 (+)
Gene ID: C50_contig_11_753
Type: pfam
Location: 829372 - 831225 (+)
Gene ID: C50_contig_11_754
Type: CAZyme
Location: 831320 - 833731 (+)
Gene ID: C50_contig_11_755
Type:
Location: 833818 - 834057 (-)
Gene ID: C50_contig_11_756
Type: pfam
Location: 834215 - 834574 (+)
Gene ID: C50_contig_11_757
Type: TC
Location: 834584 - 836611 (+)
Gene ID: C50_contig_11_758
Type: pfam
Location: 836624 - 837463 (+)
Gene ID: C50_contig_11_759
Type: pfam
Location: 837559 - 838302 (-)
Gene ID: C50_contig_11_760
Type: CAZyme
Location: 838404 - 839552 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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