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Cluster: C50.bin_3_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C50_contig_11 C50_contig_11_1557 1727449 1729185 - 8.A.46.1.6
TC C50_contig_11 C50_contig_11_1558 1729204 1732422 - 1.B.14.6.1
CAZyme C50_contig_11 C50_contig_11_1559 1732835 1735918 + PL8_2
sulfatase C50_contig_11 C50_contig_11_1560 1735942 1737300 + S1_9
pfam C50_contig_11 C50_contig_11_1561 1737457 1738410 - Dus
CAZyme C50_contig_11 C50_contig_11_1562 1738429 1739562 - GH117 | GH117
pfam C50_contig_11 C50_contig_11_1563 1739751 1741256 - SusD_RagB | SusD-like_3
TC C50_contig_11 C50_contig_11_1564 1741284 1744376 - 1.B.14.6.1
Gene ID: C50_contig_11_1557
Type: TC
Location: 1727449 - 1729185 (-)
Gene ID: C50_contig_11_1558
Type: TC
Location: 1729204 - 1732422 (-)
Gene ID: C50_contig_11_1559
Type: CAZyme
Location: 1732835 - 1735918 (+)
Gene ID: C50_contig_11_1560
Type: sulfatase
Location: 1735942 - 1737300 (+)
Gene ID: C50_contig_11_1561
Type: pfam
Location: 1737457 - 1738410 (-)
Gene ID: C50_contig_11_1562
Type: CAZyme
Location: 1738429 - 1739562 (-)
Gene ID: C50_contig_11_1563
Type: pfam
Location: 1739751 - 1741256 (-)
Gene ID: C50_contig_11_1564
Type: TC
Location: 1741284 - 1744376 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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