Cluster: C50.bin_3_CGC29
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: C50.bin_3
- CGC Family ID: CGCFAM_00138
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C50_contig_11 | C50_contig_11_1701 | 1912119 | 1913585 | - | GT2 |
| pfam | C50_contig_11 | C50_contig_11_1702 | 1913612 | 1915492 | - | Metallophos | PQQ | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 |
| NULL(UNKNOWN) | C50_contig_11 | C50_contig_11_1703 | 1915522 | 1918611 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C50_contig_11 | C50_contig_11_1704 | 1918629 | 1920083 | - | 2.A.21.3.7 |
| CAZyme | C50_contig_11 | C50_contig_11_1705 | 1920140 | 1921306 | - | GH171 |
| pfam | C50_contig_11 | C50_contig_11_1706 | 1921525 | 1923393 | - | SusD_RagB | SusD-like_3 |
| TC | C50_contig_11 | C50_contig_11_1707 | 1923407 | 1926895 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | C50_contig_11 | C50_contig_11_1708 | 1927119 | 1927238 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | C50_contig_11 | C50_contig_11_1709 | 1927313 | 1928161 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C50_contig_11 | C50_contig_11_1710 | 1928746 | 1932231 | + | 1.B.14.6.1 |
Gene ID: C50_contig_11_1701
Type: CAZyme
Location: 1912119 - 1913585 (-)
Type: CAZyme
Location: 1912119 - 1913585 (-)
Gene ID: C50_contig_11_1702
Type: pfam
Location: 1913612 - 1915492 (-)
Type: pfam
Location: 1913612 - 1915492 (-)
Gene ID: C50_contig_11_1703
Type:
Location: 1915522 - 1918611 (-)
Type:
Location: 1915522 - 1918611 (-)
Gene ID: C50_contig_11_1704
Type: TC
Location: 1918629 - 1920083 (-)
Type: TC
Location: 1918629 - 1920083 (-)
Gene ID: C50_contig_11_1705
Type: CAZyme
Location: 1920140 - 1921306 (-)
Type: CAZyme
Location: 1920140 - 1921306 (-)
Gene ID: C50_contig_11_1706
Type: pfam
Location: 1921525 - 1923393 (-)
Type: pfam
Location: 1921525 - 1923393 (-)
Gene ID: C50_contig_11_1707
Type: TC
Location: 1923407 - 1926895 (-)
Type: TC
Location: 1923407 - 1926895 (-)
Gene ID: C50_contig_11_1708
Type:
Location: 1927119 - 1927238 (-)
Type:
Location: 1927119 - 1927238 (-)
Gene ID: C50_contig_11_1709
Type:
Location: 1927313 - 1928161 (-)
Type:
Location: 1927313 - 1928161 (-)
Gene ID: C50_contig_11_1710
Type: TC
Location: 1928746 - 1932231 (+)
Type: TC
Location: 1928746 - 1932231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.