Genome Details
Selected Rep_genome_ID: C50.bin_3
Total Genomes Found: 10
Total Genomes Found: 10
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercoris
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG412_127 | 3,708,079 | 98.2% | 0.53% | NA | Africa | H3AfricaPhase2 |
| C50.bin_3 | 4,055,818 | 99.26% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR088070 | 3,364,640 | 96.55% | 0% | China | Asia | CGMR |
| Rep_467 | 3,909,752 | 99.2565% | 0.371747% | NA | NA | WIS |
| SPMP09_bin.21 | 3,326,045 | 93.85% | 0.37% | Singapore | Asia | SPMP |
| SPMP29_bin.32 | 3,493,607 | 98.19% | 0.43% | Singapore | Asia | SPMP |
| SPMP34_bin.21 | 3,341,656 | 95.4% | 0.37% | Singapore | Asia | SPMP |
| SPMP49_bin.99 | 3,516,625 | 98.33% | 0.19% | Singapore | Asia | SPMP |
| SPMP55_bin.23 | 3,442,495 | 93.98% | 2.04% | Singapore | Asia | SPMP |
| SPMP69_bin.72 | 3,428,064 | 91.34% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C50.bin_3_CGC11 | CGCFAM_01411 | Yes | 4 | 2 | |
| C50.bin_3_CGC2 | CGCFAM_01426 | Yes | 8 | 1 | |
| C50.bin_3_CGC18 | CGCFAM_02325 | Yes | 4 | 1 | |
| C50.bin_3_CGC14 | CGCFAM_02731 | Yes | 30 | 13 | |
| C50.bin_3_CGC19 | CGCFAM_03565 | Yes | 3 | 2 | |
| C50.bin_3_CGC20 | CGCFAM_03662 | Yes | 4 | 2 | |
| C50.bin_3_CGC1 | CGCFAM_04547 | Yes | 10 | 4 | |
| C50.bin_3_CGC25 | CGCFAM_05251 | Yes | 10 | 6 | |
| C50.bin_3_CGC35 | CGCFAM_07292 | Yes | 7 | 1 | |
| C50.bin_3_CGC49 | CGCFAM_07625 | Yes | 3 | 1 | |
| C50.bin_3_CGC53 | CGCFAM_08003 | Yes | 10 | 1 |
Top CAZyme Families