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Cluster: C50.bin_3_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C50_contig_7 C50_contig_7_198 212845 214035 + GT2
TC C50_contig_7 C50_contig_7_199 214048 216768 + 2.A.21.9.1
TC C50_contig_7 C50_contig_7_200 216793 218568 - 3.B.1.1.6
STP C50_contig_7 C50_contig_7_201 218977 219480 - Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) C50_contig_7 C50_contig_7_202 219500 219643 + NULL(UNKNOWN)
[View Structural Homologs]
TC C50_contig_7 C50_contig_7_203 219903 220538 - 1.A.62.2.1
pfam C50_contig_7 C50_contig_7_204 220595 221713 + Epimerase_2
TC C50_contig_7 C50_contig_7_205 222123 224717 + 1.B.14.6.14
Gene ID: C50_contig_7_198
Type: CAZyme
Location: 212845 - 214035 (+)
Gene ID: C50_contig_7_199
Type: TC
Location: 214048 - 216768 (+)
Gene ID: C50_contig_7_200
Type: TC
Location: 216793 - 218568 (-)
Gene ID: C50_contig_7_201
Type: STP
Location: 218977 - 219480 (-)
Gene ID: C50_contig_7_202
Type:
Location: 219500 - 219643 (+)
Gene ID: C50_contig_7_203
Type: TC
Location: 219903 - 220538 (-)
Gene ID: C50_contig_7_204
Type: pfam
Location: 220595 - 221713 (+)
Gene ID: C50_contig_7_205
Type: TC
Location: 222123 - 224717 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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