dbCAN Logo

Cluster: C50.bin_3_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C50_contig_7 C50_contig_7_156 165636 166451 - GT2
CAZyme C50_contig_7 C50_contig_7_157 166465 167538 - GT4
CAZyme C50_contig_7 C50_contig_7_158 167568 168665 - GT4
NULL(UNKNOWN) C50_contig_7 C50_contig_7_159 168658 169869 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C50_contig_7 C50_contig_7_160 169872 170882 - GT2
pfam C50_contig_7 C50_contig_7_161 170888 171592 - LicD
TC C50_contig_7 C50_contig_7_162 171644 173074 - 2.A.66.2.23
STP C50_contig_7 C50_contig_7_163 173142 174950 - Aminotran_1_2
NULL(UNKNOWN) C50_contig_7 C50_contig_7_164 175450 175707 - NULL(UNKNOWN)
[View Structural Homologs]
TC C50_contig_7 C50_contig_7_165 175772 176863 - 9.B.146.1.4
Gene ID: C50_contig_7_156
Type: CAZyme
Location: 165636 - 166451 (-)
Gene ID: C50_contig_7_157
Type: CAZyme
Location: 166465 - 167538 (-)
Gene ID: C50_contig_7_158
Type: CAZyme
Location: 167568 - 168665 (-)
Gene ID: C50_contig_7_159
Type:
Location: 168658 - 169869 (-)
Gene ID: C50_contig_7_160
Type: CAZyme
Location: 169872 - 170882 (-)
Gene ID: C50_contig_7_161
Type: pfam
Location: 170888 - 171592 (-)
Gene ID: C50_contig_7_162
Type: TC
Location: 171644 - 173074 (-)
Gene ID: C50_contig_7_163
Type: STP
Location: 173142 - 174950 (-)
Gene ID: C50_contig_7_164
Type:
Location: 175450 - 175707 (-)
Gene ID: C50_contig_7_165
Type: TC
Location: 175772 - 176863 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List