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Cluster: C50.bin_3_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C50_contig_11 C50_contig_11_2059 2350483 2351382 + 2.A.7.3.57
STP C50_contig_11 C50_contig_11_2060 2351399 2351869 + GAF
pfam C50_contig_11 C50_contig_11_2061 2351918 2352562 + DUF3256
TC C50_contig_11 C50_contig_11_2062 2352684 2353568 - 2.A.115.1.2
TC C50_contig_11 C50_contig_11_2063 2354003 2357206 + 1.B.14.6.1
pfam C50_contig_11 C50_contig_11_2064 2357220 2359304 + SusD_RagB | SusD-like_3
CAZyme C50_contig_11 C50_contig_11_2065 2359405 2360238 + PL1_2
Gene ID: C50_contig_11_2059
Type: TC
Location: 2350483 - 2351382 (+)
Gene ID: C50_contig_11_2060
Type: STP
Location: 2351399 - 2351869 (+)
Gene ID: C50_contig_11_2061
Type: pfam
Location: 2351918 - 2352562 (+)
Gene ID: C50_contig_11_2062
Type: TC
Location: 2352684 - 2353568 (-)
Gene ID: C50_contig_11_2063
Type: TC
Location: 2354003 - 2357206 (+)
Gene ID: C50_contig_11_2064
Type: pfam
Location: 2357220 - 2359304 (+)
Gene ID: C50_contig_11_2065
Type: CAZyme
Location: 2359405 - 2360238 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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