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Cluster: C50.bin_3_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C50_contig_11 C50_contig_11_1591 1778475 1779374 + GT2
pfam C50_contig_11 C50_contig_11_1592 1779386 1779760 - Caps_synth
CAZyme C50_contig_11 C50_contig_11_1593 1779754 1780266 - GT32
CAZyme C50_contig_11 C50_contig_11_1594 1780263 1781039 - GT6
CAZyme C50_contig_11 C50_contig_11_1595 1781043 1781906 - GT11
pfam C50_contig_11 C50_contig_11_1596 1782158 1783177 + Glyco_transf_90
CAZyme C50_contig_11 C50_contig_11_1597 1783187 1784107 + GT8
CAZyme C50_contig_11 C50_contig_11_1598 1784163 1785068 + GT2
pfam C50_contig_11 C50_contig_11_1599 1785076 1786185 - FAD_binding_2 | Amino_oxidase | GLF | NAD_binding_8
TC C50_contig_11 C50_contig_11_1600 1786416 1788254 + 3.A.1.106.2
Gene ID: C50_contig_11_1591
Type: CAZyme
Location: 1778475 - 1779374 (+)
Gene ID: C50_contig_11_1592
Type: pfam
Location: 1779386 - 1779760 (-)
Gene ID: C50_contig_11_1593
Type: CAZyme
Location: 1779754 - 1780266 (-)
Gene ID: C50_contig_11_1594
Type: CAZyme
Location: 1780263 - 1781039 (-)
Gene ID: C50_contig_11_1595
Type: CAZyme
Location: 1781043 - 1781906 (-)
Gene ID: C50_contig_11_1596
Type: pfam
Location: 1782158 - 1783177 (+)
Gene ID: C50_contig_11_1597
Type: CAZyme
Location: 1783187 - 1784107 (+)
Gene ID: C50_contig_11_1598
Type: CAZyme
Location: 1784163 - 1785068 (+)
Gene ID: C50_contig_11_1599
Type: pfam
Location: 1785076 - 1786185 (-)
Gene ID: C50_contig_11_1600
Type: TC
Location: 1786416 - 1788254 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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