dbCAN HGM

Cluster: C50.bin_3_CGC46

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	C50_contig_11	C50_contig_11_2438	2859664	2860914	+	2.A.6.2.29
TC	C50_contig_11	C50_contig_11_2439	2860924	2864034	+	2.A.6.2.22
TC	C50_contig_11	C50_contig_11_2440	2864049	2865449	+	2.A.6.2.44
pfam	C50_contig_11	C50_contig_11_2441	2865554	2867200	+	PFK
CAZyme	C50_contig_11	C50_contig_11_2442	2867343	2868191	+	GH25
pfam	C50_contig_11	C50_contig_11_2443	2868225	2869067	-	MTS \| PrmA \| Methyltransf_11 \| Methyltransf_23 \| Methyltransf_25 \| Methyltransf_31
NULL(UNKNOWN)	C50_contig_11	C50_contig_11_2444	2869272	2870531	+	NULL(UNKNOWN) [View Structural Homologs]
TC	C50_contig_11	C50_contig_11_2445	2870565	2872262	+	1.B.9.4.2

Gene ID: C50_contig_11_2438
Type: TC
Location: 2859664 - 2860914 (+)

Gene ID: C50_contig_11_2439
Type: TC
Location: 2860924 - 2864034 (+)

Gene ID: C50_contig_11_2440
Type: TC
Location: 2864049 - 2865449 (+)

Gene ID: C50_contig_11_2441
Type: pfam
Location: 2865554 - 2867200 (+)

Gene ID: C50_contig_11_2442
Type: CAZyme
Location: 2867343 - 2868191 (+)

Gene ID: C50_contig_11_2443
Type: pfam
Location: 2868225 - 2869067 (-)

Gene ID: C50_contig_11_2444
Type:
Location: 2869272 - 2870531 (+)

Gene ID: C50_contig_11_2445
Type: TC
Location: 2870565 - 2872262 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.