Cluster: C50.bin_3_CGC36
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: C50.bin_3
- CGC Family ID: CGCFAM_01268
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C50_contig_11 | C50_contig_11_2117 | 2411932 | 2414157 | + | GH92 |
| TF | C50_contig_11 | C50_contig_11_2118 | 2414177 | 2414713 | + | GerE |
| TC | C50_contig_11 | C50_contig_11_2119 | 2414861 | 2418262 | + | 1.B.14.6.2 |
| TC | C50_contig_11 | C50_contig_11_2120 | 2418310 | 2420142 | + | 8.A.46.2.1 |
| CAZyme | C50_contig_11 | C50_contig_11_2121 | 2420269 | 2421693 | + | GH18 |
| STP | C50_contig_11 | C50_contig_11_2122 | 2421807 | 2422805 | + | FecR |
| CAZyme | C50_contig_11 | C50_contig_11_2123 | 2422849 | 2425125 | + | GH92 |
| CAZyme | C50_contig_11 | C50_contig_11_2124 | 2425173 | 2427176 | + | GH97 |
| CAZyme | C50_contig_11 | C50_contig_11_2125 | 2427202 | 2429493 | + | GH92 |
| pfam | C50_contig_11 | C50_contig_11_2126 | 2429520 | 2430839 | + | MFS_1 | MFS_1 |
| CAZyme | C50_contig_11 | C50_contig_11_2127 | 2430981 | 2431964 | + | GH130_2 |
| CAZyme | C50_contig_11 | C50_contig_11_2128 | 2431987 | 2434278 | + | GH92 |
| peptidase | C50_contig_11 | C50_contig_11_2129 | 2434423 | 2434935 | - | C40.004 |
| TC | C50_contig_11 | C50_contig_11_2130 | 2434938 | 2435696 | - | 3.A.1.128.6 |
Gene ID: C50_contig_11_2117
Type: CAZyme
Location: 2411932 - 2414157 (+)
Type: CAZyme
Location: 2411932 - 2414157 (+)
Gene ID: C50_contig_11_2118
Type: TF
Location: 2414177 - 2414713 (+)
Type: TF
Location: 2414177 - 2414713 (+)
Gene ID: C50_contig_11_2119
Type: TC
Location: 2414861 - 2418262 (+)
Type: TC
Location: 2414861 - 2418262 (+)
Gene ID: C50_contig_11_2120
Type: TC
Location: 2418310 - 2420142 (+)
Type: TC
Location: 2418310 - 2420142 (+)
Gene ID: C50_contig_11_2121
Type: CAZyme
Location: 2420269 - 2421693 (+)
Type: CAZyme
Location: 2420269 - 2421693 (+)
Gene ID: C50_contig_11_2122
Type: STP
Location: 2421807 - 2422805 (+)
Type: STP
Location: 2421807 - 2422805 (+)
Gene ID: C50_contig_11_2123
Type: CAZyme
Location: 2422849 - 2425125 (+)
Type: CAZyme
Location: 2422849 - 2425125 (+)
Gene ID: C50_contig_11_2124
Type: CAZyme
Location: 2425173 - 2427176 (+)
Type: CAZyme
Location: 2425173 - 2427176 (+)
Gene ID: C50_contig_11_2125
Type: CAZyme
Location: 2427202 - 2429493 (+)
Type: CAZyme
Location: 2427202 - 2429493 (+)
Gene ID: C50_contig_11_2126
Type: pfam
Location: 2429520 - 2430839 (+)
Type: pfam
Location: 2429520 - 2430839 (+)
Gene ID: C50_contig_11_2127
Type: CAZyme
Location: 2430981 - 2431964 (+)
Type: CAZyme
Location: 2430981 - 2431964 (+)
Gene ID: C50_contig_11_2128
Type: CAZyme
Location: 2431987 - 2434278 (+)
Type: CAZyme
Location: 2431987 - 2434278 (+)
Gene ID: C50_contig_11_2129
Type: peptidase
Location: 2434423 - 2434935 (-)
Type: peptidase
Location: 2434423 - 2434935 (-)
Gene ID: C50_contig_11_2130
Type: TC
Location: 2434938 - 2435696 (-)
Type: TC
Location: 2434938 - 2435696 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.