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Cluster: C50.bin_3_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C50_contig_11 C50_contig_11_2610 3063910 3065130 - 3.A.1.122.1
TC C50_contig_11 C50_contig_11_2611 3065197 3065943 - 3.A.1.122.14
TC C50_contig_11 C50_contig_11_2612 3066004 3067239 - 8.A.1.2.2
pfam C50_contig_11 C50_contig_11_2613 3067326 3068729 - OEP | OEP
pfam C50_contig_11 C50_contig_11_2614 3069154 3069372 + DUF4492
TC C50_contig_11 C50_contig_11_2615 3069467 3071032 + 3.D.4.3.2
pfam C50_contig_11 C50_contig_11_2616 3071055 3072206 + Cyt_bd_oxida_II
TC C50_contig_11 C50_contig_11_2617 3072354 3073028 - 9.B.186.1.3
CAZyme C50_contig_11 C50_contig_11_2618 3073170 3074336 - CE9
TC C50_contig_11 C50_contig_11_2619 3074453 3075784 - 3.A.1.11.2
TC C50_contig_11 C50_contig_11_2620 3075893 3076684 - 3.A.1.11.8
TC C50_contig_11 C50_contig_11_2621 3076681 3077481 - 3.A.1.11.8
TC C50_contig_11 C50_contig_11_2622 3077577 3078959 - 3.A.1.11.8
sulfatase C50_contig_11 C50_contig_11_2623 3079321 3080082 + S1_4
TC C50_contig_11 C50_contig_11_2624 3080136 3081506 + 2.A.66.1.32
Gene ID: C50_contig_11_2610
Type: TC
Location: 3063910 - 3065130 (-)
Gene ID: C50_contig_11_2611
Type: TC
Location: 3065197 - 3065943 (-)
Gene ID: C50_contig_11_2612
Type: TC
Location: 3066004 - 3067239 (-)
Gene ID: C50_contig_11_2613
Type: pfam
Location: 3067326 - 3068729 (-)
Gene ID: C50_contig_11_2614
Type: pfam
Location: 3069154 - 3069372 (+)
Gene ID: C50_contig_11_2615
Type: TC
Location: 3069467 - 3071032 (+)
Gene ID: C50_contig_11_2616
Type: pfam
Location: 3071055 - 3072206 (+)
Gene ID: C50_contig_11_2617
Type: TC
Location: 3072354 - 3073028 (-)
Gene ID: C50_contig_11_2618
Type: CAZyme
Location: 3073170 - 3074336 (-)
Gene ID: C50_contig_11_2619
Type: TC
Location: 3074453 - 3075784 (-)
Gene ID: C50_contig_11_2620
Type: TC
Location: 3075893 - 3076684 (-)
Gene ID: C50_contig_11_2621
Type: TC
Location: 3076681 - 3077481 (-)
Gene ID: C50_contig_11_2622
Type: TC
Location: 3077577 - 3078959 (-)
Gene ID: C50_contig_11_2623
Type: sulfatase
Location: 3079321 - 3080082 (+)
Gene ID: C50_contig_11_2624
Type: TC
Location: 3080136 - 3081506 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C50_contig_11_2621 vegetarian > omnivore 1.42155 0.00473
C50_contig_11_2622 vegetarian > omnivore 1.09159 0.00717

🧭 Explore Read Mapping of CGC

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