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Genome Details

Selected Rep_genome_ID: Rep_531
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola fibrisolvens
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_531 3,695,934 97.699% 0.310945% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_531_CGC55 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_531_CGC32 CGCFAM_00016 Yes 19 8 host glycan
Rep_531_CGC49 CGCFAM_00017 Yes 8 3 fructan
Rep_531_CGC29 CGCFAM_00031 Yes 6 3 pectin/galactan
Rep_531_CGC20 CGCFAM_00101 Yes 8 4 beta-glucan
Rep_531_CGC25 CGCFAM_00120 Yes 5 3
Rep_531_CGC40 CGCFAM_00225 Yes 7 3 arabinogalactan
Rep_531_CGC35 CGCFAM_00273 Yes 24 19 xylan
Rep_531_CGC6 CGCFAM_00360 Yes 9 4 host glycan
Rep_531_CGC45 CGCFAM_00379 Yes 7 2
PUL0106_Rep_531_C2 CGCFAM_01249 Yes 20 3 host glycan
PUL0112_Rep_531_C2 CGCFAM_01249 Yes 22 3 host glycan
Rep_531_CGC27 CGCFAM_01308 Yes 9 1
Rep_531_CGC4 CGCFAM_01491 Yes 21 8
Rep_531_CGC37 CGCFAM_01540 Yes 5 2
Rep_531_CGC19 CGCFAM_01743 Yes 13 5
Rep_531_CGC13 CGCFAM_01797 Yes 7 1
Rep_531_CGC30 CGCFAM_01826 Yes 4 3
Rep_531_CGC31 CGCFAM_02414 Yes 5 1
Rep_531_CGC12 CGCFAM_02864 Yes 10 3
Rep_531_CGC14 CGCFAM_03975 Yes 21 5
Rep_531_CGC9 CGCFAM_04268 Yes 11 7
Rep_531_CGC3 CGCFAM_06353 Yes 14 8
Rep_531_CGC47 CGCFAM_11298 Yes 4 1
Top CAZyme Families