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Cluster: Rep_531_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_531_c_5 Rep_531_c_5_10 6648 7628 + GH43_29
TC Rep_531_c_5 Rep_531_c_5_11 7673 9511 - 1.I.1.1.3
pfam Rep_531_c_5 Rep_531_c_5_12 9628 10563 - Flavokinase | FAD_syn
pfam Rep_531_c_5 Rep_531_c_5_13 10568 11188 - Hydrolase | HAD_2
TC Rep_531_c_5 Rep_531_c_5_14 11189 13819 - 3.A.3.2.17
pfam Rep_531_c_5 Rep_531_c_5_15 14204 14959 + NigD_N | NigD_C
TC Rep_531_c_5 Rep_531_c_5_16 15070 16428 - 9.B.145.1.2
Gene ID: Rep_531_c_5_10
Type: CAZyme
Location: 6648 - 7628 (+)
Gene ID: Rep_531_c_5_11
Type: TC
Location: 7673 - 9511 (-)
Gene ID: Rep_531_c_5_12
Type: pfam
Location: 9628 - 10563 (-)
Gene ID: Rep_531_c_5_13
Type: pfam
Location: 10568 - 11188 (-)
Gene ID: Rep_531_c_5_14
Type: TC
Location: 11189 - 13819 (-)
Gene ID: Rep_531_c_5_15
Type: pfam
Location: 14204 - 14959 (+)
Gene ID: Rep_531_c_5_16
Type: TC
Location: 15070 - 16428 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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