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Cluster: Rep_531_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_2 Rep_531_c_2_76 106583 107818 + 2.A.1.32.1
pfam Rep_531_c_2 Rep_531_c_2_77 107834 108280 + DUF386
CAZyme Rep_531_c_2 Rep_531_c_2_78 108296 109918 + CBM93 | GH33
TC Rep_531_c_2 Rep_531_c_2_79 110272 112242 + 1.B.14.6.1
TC Rep_531_c_2 Rep_531_c_2_80 112288 113625 + 1.B.14.6.2
TC Rep_531_c_2 Rep_531_c_2_81 113640 115199 + 8.A.46.1.4
CAZyme Rep_531_c_2 Rep_531_c_2_82 115315 116796 + GH29
CAZyme Rep_531_c_2 Rep_531_c_2_83 116806 118845 + GH20
CAZyme Rep_531_c_2 Rep_531_c_2_84 118842 120920 + CE20
Gene ID: Rep_531_c_2_76
Type: TC
Location: 106583 - 107818 (+)
Gene ID: Rep_531_c_2_77
Type: pfam
Location: 107834 - 108280 (+)
Gene ID: Rep_531_c_2_78
Type: CAZyme
Location: 108296 - 109918 (+)
Gene ID: Rep_531_c_2_79
Type: TC
Location: 110272 - 112242 (+)
Gene ID: Rep_531_c_2_80
Type: TC
Location: 112288 - 113625 (+)
Gene ID: Rep_531_c_2_81
Type: TC
Location: 113640 - 115199 (+)
Gene ID: Rep_531_c_2_82
Type: CAZyme
Location: 115315 - 116796 (+)
Gene ID: Rep_531_c_2_83
Type: CAZyme
Location: 116806 - 118845 (+)
Gene ID: Rep_531_c_2_84
Type: CAZyme
Location: 118842 - 120920 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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