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Cluster: Rep_531_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_14 Rep_531_c_14_25 31382 31999 - 3.A.8.1.1
TC Rep_531_c_14 Rep_531_c_14_26 32276 36616 + 2.A.6.1.5
pfam Rep_531_c_14 Rep_531_c_14_27 36637 37554 + HlyD_3 | HlyD_D23
TC Rep_531_c_14 Rep_531_c_14_28 37563 38606 + 9.B.33.1.1
TF Rep_531_c_14 Rep_531_c_14_29 38608 39366 + LytTR
TC Rep_531_c_14 Rep_531_c_14_30 39463 41082 + 3.A.1.121.4
NULL(UNKNOWN) Rep_531_c_14 Rep_531_c_14_31 41128 41223 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_531_c_14 Rep_531_c_14_32 41240 41722 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
CAZyme Rep_531_c_14 Rep_531_c_14_33 41867 42754 + GH73
Gene ID: Rep_531_c_14_25
Type: TC
Location: 31382 - 31999 (-)
Gene ID: Rep_531_c_14_26
Type: TC
Location: 32276 - 36616 (+)
Gene ID: Rep_531_c_14_27
Type: pfam
Location: 36637 - 37554 (+)
Gene ID: Rep_531_c_14_28
Type: TC
Location: 37563 - 38606 (+)
Gene ID: Rep_531_c_14_29
Type: TF
Location: 38608 - 39366 (+)
Gene ID: Rep_531_c_14_30
Type: TC
Location: 39463 - 41082 (+)
Gene ID: Rep_531_c_14_31
Type:
Location: 41128 - 41223 (-)
Gene ID: Rep_531_c_14_32
Type: pfam
Location: 41240 - 41722 (-)
Gene ID: Rep_531_c_14_33
Type: CAZyme
Location: 41867 - 42754 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_531_c_14_33 vegetarian > vegan 1.49941 0.04344

🧭 Explore Read Mapping of CGC

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