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Cluster: Rep_531_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_531_c_3 Rep_531_c_3_50 50313 51137 - GT2
CAZyme Rep_531_c_3 Rep_531_c_3_51 51153 52208 - GT4
pfam Rep_531_c_3 Rep_531_c_3_52 52227 53276 - EpsG
CAZyme Rep_531_c_3 Rep_531_c_3_53 53286 54263 - GT2
CAZyme Rep_531_c_3 Rep_531_c_3_54 54260 54997 - GT32
CAZyme Rep_531_c_3 Rep_531_c_3_55 54994 55881 - GT2
CAZyme Rep_531_c_3 Rep_531_c_3_56 55912 56787 - GT111
pfam Rep_531_c_3 Rep_531_c_3_57 56791 57918 - FAD_binding_2 | Amino_oxidase | GLF | NAD_binding_8
CAZyme Rep_531_c_3 Rep_531_c_3_58 57905 58936 - GT2
NULL(UNKNOWN) Rep_531_c_3 Rep_531_c_3_59 58933 60681 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_531_c_3 Rep_531_c_3_60 60750 62255 + 2.A.38.1.1
Gene ID: Rep_531_c_3_50
Type: CAZyme
Location: 50313 - 51137 (-)
Gene ID: Rep_531_c_3_51
Type: CAZyme
Location: 51153 - 52208 (-)
Gene ID: Rep_531_c_3_52
Type: pfam
Location: 52227 - 53276 (-)
Gene ID: Rep_531_c_3_53
Type: CAZyme
Location: 53286 - 54263 (-)
Gene ID: Rep_531_c_3_54
Type: CAZyme
Location: 54260 - 54997 (-)
Gene ID: Rep_531_c_3_55
Type: CAZyme
Location: 54994 - 55881 (-)
Gene ID: Rep_531_c_3_56
Type: CAZyme
Location: 55912 - 56787 (-)
Gene ID: Rep_531_c_3_57
Type: pfam
Location: 56791 - 57918 (-)
Gene ID: Rep_531_c_3_58
Type: CAZyme
Location: 57905 - 58936 (-)
Gene ID: Rep_531_c_3_59
Type:
Location: 58933 - 60681 (-)
Gene ID: Rep_531_c_3_60
Type: TC
Location: 60750 - 62255 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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