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Cluster: Rep_531_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_531_c_22 Rep_531_c_22_5 5890 7086 - CE1
TC Rep_531_c_22 Rep_531_c_22_6 7217 9673 + 1.B.14.8.2
CAZyme Rep_531_c_22 Rep_531_c_22_7 9898 11907 - GH67
CAZyme Rep_531_c_22 Rep_531_c_22_8 11900 12877 - GH43_1
CAZyme Rep_531_c_22 Rep_531_c_22_9 12926 14074 - GH10
TC Rep_531_c_22 Rep_531_c_22_10 14094 15590 - 2.A.2.3.4
CAZyme Rep_531_c_22 Rep_531_c_22_11 15593 17224 - CE20 | CE20
NULL(UNKNOWN) Rep_531_c_22 Rep_531_c_22_12 17281 17511 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_531_c_22 Rep_531_c_22_13 17573 21667 + HTH_AraC
CAZyme Rep_531_c_22 Rep_531_c_22_14 21726 22592 - CE6
CAZyme Rep_531_c_22 Rep_531_c_22_15 22640 25315 - GH31_4
CAZyme Rep_531_c_22 Rep_531_c_22_16 25327 26736 - CBM6 | GH43_29
CAZyme Rep_531_c_22 Rep_531_c_22_17 26733 29132 - GH31_4
CAZyme Rep_531_c_22 Rep_531_c_22_18 29174 30508 - CBM6 | GH43_29
CAZyme Rep_531_c_22 Rep_531_c_22_19 30550 31935 - CBM6 | GH43_29
CAZyme Rep_531_c_22 Rep_531_c_22_20 31952 33913 - GH97
CAZyme Rep_531_c_22 Rep_531_c_22_21 34008 36413 - GH146
CAZyme Rep_531_c_22 Rep_531_c_22_22 36432 38039 - CBM91 | GH43_10
CAZyme Rep_531_c_22 Rep_531_c_22_23 38076 40526 - GH95
CAZyme Rep_531_c_22 Rep_531_c_22_24 40540 41409 - CE1
CAZyme Rep_531_c_22 Rep_531_c_22_25 41756 43468 + CBM91 | GH43_12
sulfatase Rep_531_c_22 Rep_531_c_22_26 43570 44895 - S1_8
CAZyme Rep_531_c_22 Rep_531_c_22_27 44905 47448 - GH115
CAZyme Rep_531_c_22 Rep_531_c_22_28 47630 49900 - GH10
Gene ID: Rep_531_c_22_5
Type: CAZyme
Location: 5890 - 7086 (-)
Gene ID: Rep_531_c_22_6
Type: TC
Location: 7217 - 9673 (+)
Gene ID: Rep_531_c_22_7
Type: CAZyme
Location: 9898 - 11907 (-)
Gene ID: Rep_531_c_22_8
Type: CAZyme
Location: 11900 - 12877 (-)
Gene ID: Rep_531_c_22_9
Type: CAZyme
Location: 12926 - 14074 (-)
Gene ID: Rep_531_c_22_10
Type: TC
Location: 14094 - 15590 (-)
Gene ID: Rep_531_c_22_11
Type: CAZyme
Location: 15593 - 17224 (-)
Gene ID: Rep_531_c_22_12
Type:
Location: 17281 - 17511 (+)
Gene ID: Rep_531_c_22_13
Type: TF
Location: 17573 - 21667 (+)
Gene ID: Rep_531_c_22_14
Type: CAZyme
Location: 21726 - 22592 (-)
Gene ID: Rep_531_c_22_15
Type: CAZyme
Location: 22640 - 25315 (-)
Gene ID: Rep_531_c_22_16
Type: CAZyme
Location: 25327 - 26736 (-)
Gene ID: Rep_531_c_22_17
Type: CAZyme
Location: 26733 - 29132 (-)
Gene ID: Rep_531_c_22_18
Type: CAZyme
Location: 29174 - 30508 (-)
Gene ID: Rep_531_c_22_19
Type: CAZyme
Location: 30550 - 31935 (-)
Gene ID: Rep_531_c_22_20
Type: CAZyme
Location: 31952 - 33913 (-)
Gene ID: Rep_531_c_22_21
Type: CAZyme
Location: 34008 - 36413 (-)
Gene ID: Rep_531_c_22_22
Type: CAZyme
Location: 36432 - 38039 (-)
Gene ID: Rep_531_c_22_23
Type: CAZyme
Location: 38076 - 40526 (-)
Gene ID: Rep_531_c_22_24
Type: CAZyme
Location: 40540 - 41409 (-)
Gene ID: Rep_531_c_22_25
Type: CAZyme
Location: 41756 - 43468 (+)
Gene ID: Rep_531_c_22_26
Type: sulfatase
Location: 43570 - 44895 (-)
Gene ID: Rep_531_c_22_27
Type: CAZyme
Location: 44905 - 47448 (-)
Gene ID: Rep_531_c_22_28
Type: CAZyme
Location: 47630 - 49900 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_531_c_22_8 vegetarian > omnivore 1.79128 0.00863
Rep_531_c_22_14 vegetarian > vegan 2.02989 0.04344

🧭 Explore Read Mapping of CGC

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