dbCAN Logo

Cluster: Rep_531_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_531_c_4 Rep_531_c_4_72 75770 76990 - GH88
CAZyme Rep_531_c_4 Rep_531_c_4_73 77005 78657 - CBM91 | GH43_10
CAZyme Rep_531_c_4 Rep_531_c_4_74 78786 80723 - GH97
pfam Rep_531_c_4 Rep_531_c_4_75 81085 82236 - Cyt_bd_oxida_II
TC Rep_531_c_4 Rep_531_c_4_76 82271 83743 - 3.D.4.3.2
pfam Rep_531_c_4 Rep_531_c_4_77 83806 84024 - DUF4492
TC Rep_531_c_4 Rep_531_c_4_78 84167 85510 + 3.A.1.109.5
pfam Rep_531_c_4 Rep_531_c_4_79 85523 86746 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC Rep_531_c_4 Rep_531_c_4_80 86759 87505 + 3.A.1.122.2
TC Rep_531_c_4 Rep_531_c_4_81 87525 88745 + 3.A.1.122.1
Gene ID: Rep_531_c_4_72
Type: CAZyme
Location: 75770 - 76990 (-)
Gene ID: Rep_531_c_4_73
Type: CAZyme
Location: 77005 - 78657 (-)
Gene ID: Rep_531_c_4_74
Type: CAZyme
Location: 78786 - 80723 (-)
Gene ID: Rep_531_c_4_75
Type: pfam
Location: 81085 - 82236 (-)
Gene ID: Rep_531_c_4_76
Type: TC
Location: 82271 - 83743 (-)
Gene ID: Rep_531_c_4_77
Type: pfam
Location: 83806 - 84024 (-)
Gene ID: Rep_531_c_4_78
Type: TC
Location: 84167 - 85510 (+)
Gene ID: Rep_531_c_4_79
Type: pfam
Location: 85523 - 86746 (+)
Gene ID: Rep_531_c_4_80
Type: TC
Location: 86759 - 87505 (+)
Gene ID: Rep_531_c_4_81
Type: TC
Location: 87525 - 88745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List