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Cluster: Rep_531_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_531_c_2 Rep_531_c_2_30 33631 36222 + CBM32
pfam Rep_531_c_2 Rep_531_c_2_31 36310 37791 - tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C
CAZyme Rep_531_c_2 Rep_531_c_2_32 37889 39829 - GH97
NULL(UNKNOWN) Rep_531_c_2 Rep_531_c_2_33 39826 39978 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_531_c_2 Rep_531_c_2_34 39995 41011 - GH43_5
CAZyme Rep_531_c_2 Rep_531_c_2_35 41162 43063 - GH43_4
pfam Rep_531_c_2 Rep_531_c_2_36 43132 44916 - Big_3
pfam Rep_531_c_2 Rep_531_c_2_37 44990 46741 - SusD_RagB | SusD-like_3
TC Rep_531_c_2 Rep_531_c_2_38 46778 49975 - 1.B.14.6.1
TF Rep_531_c_2 Rep_531_c_2_39 50219 54430 - HTH_AraC
CAZyme Rep_531_c_2 Rep_531_c_2_40 54672 56651 + GH51_2
NULL(UNKNOWN) Rep_531_c_2 Rep_531_c_2_41 56712 56825 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_531_c_2 Rep_531_c_2_42 57199 60546 - GH2
CAZyme Rep_531_c_2 Rep_531_c_2_43 60785 63010 - GH92
NULL(UNKNOWN) Rep_531_c_2 Rep_531_c_2_44 63273 63716 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_531_c_2 Rep_531_c_2_45 63640 65283 - SusD_RagB | SusD-like_3
TC Rep_531_c_2 Rep_531_c_2_46 65308 68448 - 1.B.14.6.1
CAZyme Rep_531_c_2 Rep_531_c_2_47 68750 71593 + GH3
TC Rep_531_c_2 Rep_531_c_2_48 71789 73306 - 8.A.46.1.3
TC Rep_531_c_2 Rep_531_c_2_49 73334 74287 - 1.B.14.6.1
TC Rep_531_c_2 Rep_531_c_2_50 74300 76441 - 1.B.14.6.1
Gene ID: Rep_531_c_2_30
Type: CAZyme
Location: 33631 - 36222 (+)
Gene ID: Rep_531_c_2_31
Type: pfam
Location: 36310 - 37791 (-)
Gene ID: Rep_531_c_2_32
Type: CAZyme
Location: 37889 - 39829 (-)
Gene ID: Rep_531_c_2_33
Type:
Location: 39826 - 39978 (-)
Gene ID: Rep_531_c_2_34
Type: CAZyme
Location: 39995 - 41011 (-)
Gene ID: Rep_531_c_2_35
Type: CAZyme
Location: 41162 - 43063 (-)
Gene ID: Rep_531_c_2_36
Type: pfam
Location: 43132 - 44916 (-)
Gene ID: Rep_531_c_2_37
Type: pfam
Location: 44990 - 46741 (-)
Gene ID: Rep_531_c_2_38
Type: TC
Location: 46778 - 49975 (-)
Gene ID: Rep_531_c_2_39
Type: TF
Location: 50219 - 54430 (-)
Gene ID: Rep_531_c_2_40
Type: CAZyme
Location: 54672 - 56651 (+)
Gene ID: Rep_531_c_2_41
Type:
Location: 56712 - 56825 (-)
Gene ID: Rep_531_c_2_42
Type: CAZyme
Location: 57199 - 60546 (-)
Gene ID: Rep_531_c_2_43
Type: CAZyme
Location: 60785 - 63010 (-)
Gene ID: Rep_531_c_2_44
Type:
Location: 63273 - 63716 (+)
Gene ID: Rep_531_c_2_45
Type: pfam
Location: 63640 - 65283 (-)
Gene ID: Rep_531_c_2_46
Type: TC
Location: 65308 - 68448 (-)
Gene ID: Rep_531_c_2_47
Type: CAZyme
Location: 68750 - 71593 (+)
Gene ID: Rep_531_c_2_48
Type: TC
Location: 71789 - 73306 (-)
Gene ID: Rep_531_c_2_49
Type: TC
Location: 73334 - 74287 (-)
Gene ID: Rep_531_c_2_50
Type: TC
Location: 74300 - 76441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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