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Cluster: Rep_531_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_531_c_8 Rep_531_c_8_67 64923 67556 - CBM91 | GH43_12 | GH43_16
pfam Rep_531_c_8 Rep_531_c_8_68 67614 67820 - Glyco_hydro_43
CAZyme Rep_531_c_8 Rep_531_c_8_69 67931 69382 - GH5_4
pfam Rep_531_c_8 Rep_531_c_8_70 69401 70876 - TIG | SGBP_B_XBD
pfam Rep_531_c_8 Rep_531_c_8_71 70888 72537 - SusD_RagB | SusD-like_3
TC Rep_531_c_8 Rep_531_c_8_72 72558 75740 - 1.B.14.6.1
CAZyme Rep_531_c_8 Rep_531_c_8_73 76147 78291 - CBM91 | GH43_10
CAZyme Rep_531_c_8 Rep_531_c_8_74 78546 80900 - GH3
Gene ID: Rep_531_c_8_67
Type: CAZyme
Location: 64923 - 67556 (-)
Gene ID: Rep_531_c_8_68
Type: pfam
Location: 67614 - 67820 (-)
Gene ID: Rep_531_c_8_69
Type: CAZyme
Location: 67931 - 69382 (-)
Gene ID: Rep_531_c_8_70
Type: pfam
Location: 69401 - 70876 (-)
Gene ID: Rep_531_c_8_71
Type: pfam
Location: 70888 - 72537 (-)
Gene ID: Rep_531_c_8_72
Type: TC
Location: 72558 - 75740 (-)
Gene ID: Rep_531_c_8_73
Type: CAZyme
Location: 76147 - 78291 (-)
Gene ID: Rep_531_c_8_74
Type: CAZyme
Location: 78546 - 80900 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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